Streptococcus ferus: NCTC12278_00678
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Entry
NCTC12278_00678 CDS
T07132
Symbol
rexB
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sfer
Streptococcus ferus
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfer03400
]
NCTC12278_00678 (rexB)
Enzymes [BR:
sfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12278_00678 (rexB)
DNA repair and recombination proteins [BR:
sfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC12278_00678 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
HTH_12
Motif
Other DBs
NCBI-ProteinID:
SQF39999
UniProt:
A0A2X3VXW7
LinkDB
All DBs
Position
1:660641..664009
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AA seq
1122 aa
AA seq
DB search
MYSGWKRINFCLDFNIFNLGVEKGLKDGFFVIIRLRLLEREQAMKLLYTGISNDLTAILS
EEARQFAAAGKRVFYIAPNSLSFEKEQKVLSLIPERASFAITITRFAQLARYFSFRQAIS
KENIDDTGLTMLLYRLLSQFSERDLKAFGRLKQDPNFVKQLLDLYKELKTANMTAADLKD
LESPEKAEDLQKIFASLEDNLQAGNYDNQSKLSFLADKLQSGQLDQALQDTVFIIDGFTR
FSAEEEHLVTLLNNRCADLVIGTYVSQKAYQSNFSAGNVYQAGLDFIRHLAAKFHVKPEL
RESVQKSLPAFDKLSRIFEGNHDFRPSDLVLTEADKQYLTIWEVINQKEEVEQVAKAIRQ
KLYEGHRYKDILVLLGDVESYRLQIGKIFDKYEIPYDVARAESMSAHPLVHFMESLRRIK
RYNFRPDDVMNLFKSGLYGQISQDQLDKFEQYVIYADIKGQAKFARNFTLTKQGKFDLAA
LNQWREALVTPLQELTAVRKQLGKNLLQKLLQFFEKVSLTENFTVLAKSGSENQLERHEE
VWKTFSHILEQFHQIFGDHKMTLDELLSLLGSGMMAAQYRTVPAAVDVVAVKSYDLVEPH
SKPFVFALGMTQSHFPKIAQNKTLISDQERLKINEAKEKTETHRRFDVISKENLKKNHFA
ALSLFNAASQELVLSLPQILNESEDSMSSYLKELVQMGVPLVEKGRHQEAAAPEDIGNYK
ALLSRLVTLNRSDITQELSEKEETFWTAAVRYLRRKLDKEGITIPTINAGLVSKKVSQEV
MDSRFPSTEPLRLSASALETFYNNQYLYFLRYVLGLQEVETVRPDARNYGTYLHRVFELY
VGDKSPDSFDQKLDRAIAKTKSEEAFRLLYADNQDSRYALEVLDDIARSTGSLLAELKQD
QVKSQEAPFDFLLDQGVKVTGFIDRIDYLPEAGFGVVDYKSGKHTFDIRKFYNGLNSQLP
TYLEALHHLKDMSAAPFFGAMYLHMQEPKLKLSEVNDLAQLVEKAHKELSYKGLFRQDSK
AVLTGGNYQLTNSLYSEDELAVLLAHNKGLYRQAAQQIRQGTFLINPYSQDGRSVQGEQL
KAITGFEADRHMAYARQLIDTPTKKKREAFLELMQGKETDNA
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtattctggctggaagcgcattaatttttgtcttgattttaatatttttaatctaggg
gttgaaaaagggcttaaagacggcttttttgttataataagactaagacttttagaacgg
gaacaggctatgaaactactttatacaggcattagcaatgatttaacagctattttatcc
gaggaggccagacagtttgcggcagcagggaaacgggttttttacattgctcccaattcg
ctgtcttttgaaaaggagcagaaggttttgagtctgattcctgaaagggcctcgtttgcg
ataacgattacacgttttgctcagctggcaaggtatttttcgtttagacaggctatttct
aaagaaaacattgacgatactggcttgacgatgttactctatcgtctcttatcccaattt
tcagagagggacttgaaagcttttggcaggctgaagcaagaccctaattttgttaagcag
ctgctggatctgtataaagagctaaagacagctaatatgaccgcagccgatttaaaggat
ttagagtctccagaaaaagccgaagacctgcagaagatttttgctagtttggaagacaat
ttgcaggcaggtaattatgacaaccaaagcaagctgtcttttttggcggataagttgcaa
tctggtcagctggatcaggcattacaagataccgtcttcatcattgatggcttcacccga
ttttcagcagaagaagaacatttagtcacgcttttgaataaccgctgtgccgatcttgtc
attggtacctatgtcagtcaaaaggcttaccagtccaatttttcagccggtaatgtctat
caggcggggctggattttatacggcatctggcggctaagtttcacgttaagccggaattg
agagaatctgttcagaaaagtctgcctgcttttgataagttatcaaggatatttgaaggc
aatcatgattttagaccttctgatctggttctgacagaggctgataagcagtacctgact
atatgggaggtcatcaaccaaaaagaagaggtcgaacaggttgccaaagcgatccgtcaa
aagctttatgagggccaccgttataaggacattttggtcttgttgggggatgtcgaaagt
tacaggctgcagattggcaagatttttgataaatatgagattccctatgacgttgccaga
gctgaatccatgagtgcgcaccctcttgttcattttatggagagtcttcgacggattaag
cgttataatttccgtccggatgatgtgatgaatctctttaagtcaggtctttatggacag
atcagccaggaccagttggacaagtttgaacaatatgtcatctatgcggatattaagggg
caggcaaaatttgctcgaaactttactctgacaaaacaggggaaatttgatcttgctgca
ctcaatcagtggcgggaggctctggtgactccgcttcaagaattgacggcggtacgcaag
cagctagggaaaaatttgctgcagaaattgctgcagttttttgagaaggtttctttaacg
gagaattttaccgttttggccaagagtggcagtgagaatcagcttgagcgacatgaggag
gtctggaaaactttcagtcatattctggagcagttccatcagattttcggtgaccataaa
atgactttggatgagctcttgtcacttcttggcagcgggatgatggctgcccaataccgg
acggtgcctgctgcggttgatgtggtggcagtcaaatcttatgatctggttgaacctcac
agcaagccttttgtttttgctttgggtatgacccagtctcattttccaaagattgctcag
aataagaccctgatctctgaccaagaacgccttaaaatcaatgaagcaaaggaaaagact
gaaacgcatcggcgttttgatgtcatcagcaaagaaaatcttaaaaagaaccattttgct
gctctttccctttttaatgcagccagtcaggaactggttttgagcctgccgcagattcta
aacgagtctgaggacagcatgtcttcttatctgaaagaacttgttcaaatgggggttcct
cttgtggaaaaaggccgtcaccaagaagccgctgcccccgaagatatcggcaactataag
gcgctgttatcacgcttggtgacccttaaccgttctgacatcactcaagaactgtccgaa
aaggaagaaacgttttggacagcagcggtacgctatctgaggcgaaaactagataaagaa
ggcatcacgattccaactatcaatgctggtttggtcagcaaaaaggtgagccaagaggta
atggacagccgttttccatcaactgaaccactgagattgtcagcttcggcgctagagacg
ttctataacaatcagtacctgtattttttacgttatgttttaggtcttcaggaagtggag
accgttcggccagatgccagaaattacgggacctacctgcaccgggtctttgagctttat
gttggtgataagagtccggacagttttgatcaaaagttggacagggccattgcaaaaacc
aagagtgaagaagcctttcgtctgctttatgcggacaaccaggacagtcgctacgcttta
gaggttttagatgatattgcgcgtagcacaggaagtttattggcagagcttaagcaggat
caggttaagagccaggaggcaccctttgactttctgcttgatcagggcgtgaaggtgaca
ggctttattgatcgaatcgattatctgccagaagcaggttttggtgtggtagactataaa
tcgggcaagcatacctttgatatccgaaaattttataatggtctaaattctcagctgcca
acttatctggaggctcttcatcatctaaaggacatgtctgcagccccgttttttggagcc
atgtatctccacatgcaggagcctaagctgaaactgtctgaggttaatgatctggcccaa
ttggttgaaaaagcgcataaagagctgagctataaaggacttttcagacaggacagtaag
gcagtgctgacaggcggcaactatcagctaacgaattcactctattcggaggatgagctg
gcagttttactggctcataataagggcttgtacaggcaagccgcgcagcagattcgccaa
gggacgttcctcatcaatccttacagtcaggatggcagatctgtccaaggggagcagctc
aaggcgattaccggttttgaagccgaccggcacatggcttatgcccgtcagctgatagat
actcccaccaagaagaaacgagaagctttcttagaattaatgcagggaaaggagacggac
aatgcttaa
DBGET
integrated database retrieval system
