Streptococcus ferus: NCTC12278_00679
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Entry
NCTC12278_00679 CDS
T07132
Symbol
addA
Name
(GenBank) exonuclease RexA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sfer
Streptococcus ferus
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfer03400
]
NCTC12278_00679 (addA)
Enzymes [BR:
sfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12278_00679 (addA)
DNA repair and recombination proteins [BR:
sfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC12278_00679 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
DUF2059
AAA_7
Lipoprotein_Ltp
Motif
Other DBs
NCBI-ProteinID:
SQF40002
UniProt:
A0A2X3XZU7
LinkDB
All DBs
Position
1:664002..667643
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AA seq
1213 aa
AA seq
DB search
MLKKEFLTADQISALQEKELASDKKQKRTAEQIEAIYANGTNILVSASAGSGKTFVMVER
IIDQILRGVSVNQLFISTFTVKAAGELKERLEKKIRQAQDNTADPEVKQFLTQQLVDLQT
ADIGTMDAFTQKLVNQYGYTLGISPNFRILQDESEQMLIKNEVFADLFADYMKRPQTDMF
KQLVKNFAGSRKDNIPFKQIVYSIYNFSQATDSPERWLRENFLKGAKTFTDFSALPEQEI
KDLLTSMEQTAESLRDLTELEDYKQVTKKGEKTATYKKHLVLIEKLDEWSSNFSSLYGRQ
GVGRLAQDLVGLLPSGSDVTVAGVKYPVFKGLHGRLAGFKHLETILKYQAQSLPLLEILQ
EFVLDFSEQYLQAKKEENSFEFSDIAHFAIDILEKNDTIRQLYQLKYHEIMVDEYQDNSH
TQEKMLELLSNGHNRFMVGDIKQSIYRFRQADPEIFNQKFKTYQAHPEEGKLILLKENFR
SQSEVLDTTNCIFSHLMDENVGEIRYDDTHQLVAGSAGQKEGHPENETELLLYDMDSAQD
DLAGEEADTISPGEVKLVAKEIIRLHNDEKVKFEEMTLLVSSRTRNDNILKTFENYGIPL
VADDGEQNYLKSLEVMVMLDTLRALDNPLNDYALVALLRSPMFSFDEDDLARLSLQESEE
SSKQNLYEKMQNVSNHQGRHGELVTEALRVKLDSFFETFLAWRAFAKLHSLHDLIWKIYN
DRFYYDYVGSLPKAAQRQANLYALALRANQFEQTGFKGLARFIGMIDKVLENEKDLAAVE
VALPKNAVSLMTIHKSKGLEFKYVFVLNLDKRFSAVDINSSVILSRQNGIGIKYLADMKE
ELGEQKLPSLKVSMDTLPYQINKRELRLATLSEQMRLLYVAMTRAETKLYLVGKGSQEKL
TDKYDGKSENHRLPVASRESFMTFQDWFLAIQEAYKTENLHFKSRYVTDQDLTEEKIGTI
ETQSRFAPDNLKDNRQSEDIAQALDMLEAVEKINQKYQAAIELPTLRTPSQLKRPKVSEG
EGEQLALIGSQEKKATADTISFALPDFGKTTSISPTDLGSALHELMQKIDLSRPISRSHL
AETLTSLPQEAAVKKQIDLHKVQQFFQTPLGQEILAHKDRVHREAPFAMLKKDEASGEDF
VIRGIIDGYILYEDRIVLFDYKTDRYQNHTQLRERYQEQMALYQEALSQAYGIRQVDCYL
ILFGGQDLEVIRL
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaaagagtttttaacagctgaccagatctcagccttgcaggaaaaagaactt
gcttcggataaaaaacaaaagcggacagctgagcagattgaagctatttatgctaacgga
accaatattttggtttctgcttctgccggttcgggcaagacttttgttatggtggagcgg
attattgaccagattctaagaggtgttagtgtgaaccagctctttatttcgacctttacg
gtaaaggcggctggagagctcaaagagcgtctggaaaagaaaatcagacaggctcaggac
aatacagctgatccagaagtcaaacagtttttgacgcagcagttggtcgatctccaaact
gctgatataggaaccatggatgctttcacccagaagttggttaaccagtatggctatacg
cttgggatttctccaaactttcgaattttgcaggatgagagcgagcaaatgcttatcaag
aatgaggtgtttgcggatttgtttgccgactatatgaagcgtccgcagacggatatgttt
aagcagctagtaaagaattttgctggcagccgtaaggacaatattccctttaagcagatt
gtttatagcatttataactttagtcaggctaccgacagccctgaaaggtggttgcgggaa
aactttcttaaaggcgcaaaaacgtttacagacttttcggcccttccagaacaggaaatc
aaagatttgttgaccagtatggagcagacggcagaaagcttgagagacctgacggagctg
gaagactataagcaagtcacaaagaagggagaaaaaacagcaacctataagaagcatctc
gttttaatcgagaaacttgatgaatggtcttcaaacttttctagcctttatggccgccaa
ggcgtggggcggctggctcaagacttggtaggtttattgccatcgggttctgatgttacc
gtggctggggtgaaataccctgtctttaaggggttacatggacggcttgctggattcaag
catttggaaaccatcttgaaataccaagcacaaagccttccgcttttagaaatcttgcag
gaattcgtccttgatttttcagaacaatacctgcaagccaaaaaagaagaaaattctttt
gagttttcggatattgcacattttgccattgacatcctggaaaaaaatgacactattcgg
cagctctaccagctcaaatatcatgaaattatggtcgatgaatatcaggacaacagtcac
acgcaggagaagatgctggaacttttgtcgaatgggcacaatcgcttcatggtgggagat
atcaagcagtctatctatcgttttcgacaagcagatcctgaaatcttcaaccagaagttc
aagacctatcaagcacatccagaagaaggaaaactgattctgctcaaagaaaatttccgc
agccagtcggaagttttagacacgacgaattgtattttcagccacctgatggatgaaaat
gtcggggagatccgctacgatgatacgcatcagctggttgctggaagtgctggtcaaaag
gaggggcatccagaaaatgagaccgagcttcttctctatgatatggatagtgctcaggac
gatcttgcaggcgaggaagcagataccatcagtcctggagaagttaagctggttgccaaa
gagattatccgcctccacaatgacgagaaggtcaagtttgaggagatgaccctgttggtc
tcttcaagaacacgaaatgacaatatcctaaagacttttgagaactacgggattccactg
gtggcagatgacggcgagcaaaattaccttaaatctctggaagtgatggttatgctggac
actttgagagcacttgacaatcctctcaatgactatgccttggttgctcttctgcgttcg
ccgatgttctcctttgatgaggatgatctggctagactttccctgcaggaatcagaagaa
agttccaagcagaatctctatgaaaaaatgcagaacgtcagcaatcaccaaggtcgccac
ggagaattggtcacagaagctctaagggtcaagctagacagtttctttgagacctttttg
gcttggcgggcttttgccaagttacattctctgcatgacttgatttggaaaatttacaat
gaccggttctactatgactatgtcggcagcctgccaaaggcggcgcaaagacaggccaac
ctctatgcccttgccctacgtgccaatcaatttgagcagacaggctttaaaggccttgcc
cgttttattgggatgattgacaaggtcttggaaaatgagaaggatctggcagccgttgaa
gttgcccttcctaaaaatgcggtcagcttgatgaccattcacaaaagcaagggtcttgag
ttcaagtacgtctttgtcctcaatctggataagagatttagcgctgttgacatcaattca
tcggtcatcctatcccgtcagaacgggataggtatcaagtatctggcggatatgaaagag
gaattgggtgaacagaaactgccgagccttaaggtcagcatggacacactcccttaccaa
atcaataagcgagaactgagactggcgacgctgtcagaacagatgcgcctgctctatgtg
gctatgacaagagcagaaacaaaattgtatctggtgggtaaaggcagtcaggaaaaattg
accgataagtatgatggcaagtctgaaaatcaccgtttgccagttgctagccgagaaagc
tttatgaccttccaagactggtttctggctatacaagaggcttacaagacggaaaatctt
cattttaaaagccgttatgtgacggatcaggacctgaccgaagaaaagatagggactatt
gaaacccagagcaggtttgcgcccgataatctcaaagataaccgtcagtctgaggatatt
gcacaagctctagatatgctggaggcggtcgaaaagatcaatcagaaataccaagcagcg
attgaactgccaaccctgagaacgccaagccagctaaaacggcccaaagtttctgagggt
gagggcgaacagcttgccttaatcggcagtcaagaaaagaaagcgactgctgacaccatc
tcctttgccctgcctgattttggtaagacaaccagcattagcccaactgatttgggttca
gccctgcatgaattgatgcagaagattgacctaagtcggccgatcagtcgcagccatttg
gcagaaacactgacgtctttgccacaggaggcggcggttaaaaagcagattgatttgcat
aaggttcagcagttctttcagacaccgctcggtcaggaaatattggctcataaggacaga
gtccatcgtgaagccccttttgccatgcttaagaaagatgaagccagcggtgaagatttt
gtgattagagggattattgacggctatattctgtacgaggatcggattgtcctttttgac
tacaaaacagatcgataccaaaatcacacccagctcagagagcgttatcaggagcagatg
gctctttatcaggaagctctgagtcaggcttatgggatccgtcaggtggattgttatttg
attctttttggaggtcaggacttggaggtgattcgcttatga
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integrated database retrieval system
