Streptococcus ferus: NCTC12278_00935
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Entry
NCTC12278_00935 CDS
T07132
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfer
Streptococcus ferus
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfer03032
]
NCTC12278_00935 (topA)
03400 DNA repair and recombination proteins [BR:
sfer03400
]
NCTC12278_00935 (topA)
Enzymes [BR:
sfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC12278_00935 (topA)
DNA replication proteins [BR:
sfer03032
]
Prokaryotic type
DNA Topoisomerases
NCTC12278_00935 (topA)
DNA repair and recombination proteins [BR:
sfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC12278_00935 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
C1_2
DUF2996
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
SQF40368
UniProt:
A0A2X3VLR9
LinkDB
All DBs
Position
1:complement(910455..912572)
Genome browser
AA seq
705 aa
AA seq
DB search
MATKTQTKTKKTSKKRATPKKNLVIVESPAKAKTIEKYLGRSYKVVASVGHIRDLKKSSM
SIDFDDNYKPQYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAISWHLAHILDLDP
KAKNRVVFNEITKDAVKNAFVEPREIDMDLVDAQQARRVLDRIVGYSISPILWKKVKKGL
SAGRVQSVALKLIIDRENEIKAFIPEEYWTIDGLFQKGTKKFQANFYGLDGKKVKLSNND
EVKEVLARIKTDDFLVDKVEKKERKRNAPLAYTTSSLQQDAANKINFRTRKTMMVAQQLY
EGLNLGSNGHQGLITYMRTDSTRISPVAQNEAADFIKERFGSQYSKQGSKVRNASGAQDA
HEAIRPSNVHYTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAIFDTMKVHLEQNGVRFV
ANGSQVKFDGYLAVYNDSDKNKMLPEMSQGEIVKKVSANPEQHFTQPPARYSEASLIKTL
EENGVGRPSTYAPTLETIQKRYYVKLAAKRFEPTELGEIVNSLIVEFFPDIVDVKFTAEM
EGKLDQVEIGKEEWQKVIDQFYQPFEKEVVKAEEEMEKIQIKDEPAGFDCDVCGHPMVIK
LGRYGKFYACSNFPDCRNTKAITKEIGVTCPICHKGQVIERKTKRNRLFYGCDRYPECDF
TSWDKPVGRECPKSGDFLVEKKVRGGGKQVICSNEACDYKEEKIK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacaaaaacccaaacaaaaacgaaaaaaacaagtaaaaaacgggccacccctaaa
aaaaatctagtgattgtggaatcgcctgccaaagccaaaaccatcgaaaaatatttaggg
cgttcttataaggtcgttgcctcagtggggcatatccgagatttgaaaaaatccagtatg
tcaattgattttgacgacaactataagccgcaatatattaatatccgtggtaagggtccc
ttgatcaattctcttaaaaaagaagccaaaaatgctaaacaagttttcttggcaagtgac
ccggaccgtgaaggagaagccatttcctggcatttagcccatattctggatttagatcca
aaggctaaaaaccgtgttgttttcaatgaaatcactaaagacgccgtaaaaaatgctttt
gtggagcctcgtgaaatcgatatggatttagttgacgctcagcaggcgaggcgtgtgttg
gatcggattgtcggctattccatttcacctattttatggaagaaagttaaaaaaggactt
tctgctggacgtgttcagtctgtggctctcaagctcattatcgatcgtgaaaatgaaata
aaagccttcattccggaagagtattggaccattgatggtctcttccaaaaagggactaaa
aagtttcaagcaaacttttacggtcttgatggtaaaaaggttaagctgtcgaacaacgat
gaggttaaagaggttctggctcgtattaagaccgatgactttttagtagataaggttgag
aaaaaagagcgtaagcgcaatgcaccacttgcctatacgacctcctctttgcagcaggat
gctgctaataagatcaacttccgtacccgaaagaccatgatggttgcccagcaactgtat
gagggtctcaatctaggttcaaatggccatcaggggctcatcacctatatgcgtacggat
tcaactcgtatcagccccgttgctcaaaacgaagcagccgacttcatcaaagaacgtttt
ggaagtcaatactccaaacagggaagcaaagtccgcaatgcctccggcgcccaagacgcc
cacgaggctatccgtccctctaatgttcattatacgcccgaatcaatcgctaaatacctt
gataaagatcaactgaaactttatactcttatctggaatcgctttgtggctagtcaaatg
acagcagcgatttttgacaccatgaaagttcatctggagcaaaatggcgtccgctttgta
gctaacggcagtcaggtgaaatttgacggttatctagctgtctataatgactccgataaa
aataaaatgcttccggaaatgagccaaggagaaatcgttaagaaagtctctgccaatcct
gaacagcactttacccagccgcctgctcgctattcagaagctagtttgattaaaacgctg
gaagaaaatggtgtcggtcgtccatcgacatacgcaccgactctggaaactatccaaaag
cgttactatgttaaattagctgccaaacggtttgaaccgacagaattaggagaaatcgtg
aatagcttgattgtggagttctttcctgatattgtcgatgtcaagttcactgcagaaatg
gaaggtaagctagaccaggtcgaaatcggtaaagaagaatggcaaaaggttatcgatcaa
ttttaccaaccctttgaaaaagaagttgtcaaggcagaagaagagatggaaaagatccag
attaaggatgagcctgctggttttgactgcgatgtctgcggacatcctatggtaatcaaa
ctggggcgttacggtaagttttatgcctgtagtaatttccccgactgccgcaataccaaa
gccattaccaaggaaatcggggtaacttgtcctatctgccacaaagggcaagttatcgaa
cggaaaacgaaacggaatcgtcttttctacggatgcgatcgttatccagaatgtgatttt
acttcttgggataagccagttggacgtgagtgcccgaaatcaggagatttcttagttgaa
aagaaagtccgtggtggcggaaaacaagtcatctgcagcaatgaagcatgtgattacaaa
gaagaaaagatcaaataa
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