Streptococcus ferus: NCTC12278_01161
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Entry
NCTC12278_01161 CDS
T07132
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sfer
Streptococcus ferus
Pathway
sfer02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC12278_01161 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfer03021
]
NCTC12278_01161 (rpoD)
Transcription machinery [BR:
sfer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC12278_01161 (rpoD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
SQF40589
UniProt:
A0A2X3VZV7
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All DBs
Position
1:complement(1131241..1132350)
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AA seq
369 aa
AA seq
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MAKKTNSSTFNVQVADFIRNHKKEGTAVDDDVTEKLVIPFTLDADQIDDLLERLTDGGIS
ITDKDGNPSTKYVVEEIKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
AIAVENGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIG
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPIDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLRDFVED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaaacaaattctagtacatttaatgttcaagttgctgattttatccgtaac
cacaaaaaagaaggaactgccgttgacgatgatgtaactgaaaaattggttattcctttt
acactggatgcagatcaaatcgatgatttgttagaacgtctgactgacggtggtatttcc
attacagataaagacggaaatccttcaaccaagtatgtagttgaagaaattaaaccagaa
gagctgacagatgaggagttgctaggcagtaactctgctaaggttaacgatccagttcgg
atgtacctcaaagaaatcggagtggttcctctcttaaccaatgaggaagaaaaagaactg
gcaattgctgtagaaaacggtgatttagaagccaagcagcgtctggcggaagccaatctg
cgcttggtggtttcgatcgctaaacgctatgtaggccgcgggatgcagtttcttgatttg
attcaggaaggcaatatggggctcatgaaggcggtagacaagtttgactattccaaaggg
tttaagttttcaacttatgcgacttggtggattcgtcaagccattacacgtgcgattgca
gatcaagccagaaccatccgcatccctgttcatatggtggaaaccatcaataaactggtc
cgtgaacagcgtaaccttctgcaagaactaggccaggatcctacccctgaacaaattggg
gaacggatggacatgacaccggataaggtgcgtgaaattctcaaaattgctcaggaaccc
gtttctcttgaaaccccgattggagaagaagatgacagccatttgggtgactttatcgaa
gatgaagtgatcgaaaatccgattgattatacaacacgggttgttcttcgggaacaattg
gatgaggtgctggatacactcacagaccgtgaagagaacgttctgcgtctgcgttttggt
cttgatgatggcaagatgcgtacgttggaggatgtgggcaaggtttttaatgtgacccgc
gaacgtatccgacagatcgaggctaaggctctgcgcaaattgcgtcatccaagccgcagc
aaacagctccgtgactttgtagaagattaa
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integrated database retrieval system
