Streptococcus ferus: NCTC12278_01770
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Entry
NCTC12278_01770 CDS
T07132
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfer
Streptococcus ferus
Pathway
sfer03030
DNA replication
sfer03410
Base excision repair
sfer03420
Nucleotide excision repair
sfer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12278_01770 (polA)
03410 Base excision repair
NCTC12278_01770 (polA)
03420 Nucleotide excision repair
NCTC12278_01770 (polA)
03440 Homologous recombination
NCTC12278_01770 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfer03032
]
NCTC12278_01770 (polA)
03400 DNA repair and recombination proteins [BR:
sfer03400
]
NCTC12278_01770 (polA)
Enzymes [BR:
sfer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12278_01770 (polA)
DNA replication proteins [BR:
sfer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC12278_01770 (polA)
DNA repair and recombination proteins [BR:
sfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC12278_01770 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12278_01770 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Mt_ATP_synt
Motif
Other DBs
NCBI-ProteinID:
SQF41171
UniProt:
A0A2X3Y1H3
LinkDB
All DBs
Position
1:complement(1696066..1698702)
Genome browser
AA seq
878 aa
AA seq
DB search
MTNKKKLLLIDGSSVAFRAFFALYQQLDRFKNKSGLHTNAIYGFHLMLDHIMKRVEPTHI
LVAFDAGKTTFRTEMFKDYKAGRAKTPDEFREQLPHIREMLTALGVPFYDLENYEADDII
GTLDKMAEDGDQYEVTIVSGDKDLIQLTDSNTVVEISKKGVAEFEEFTPTYLMEKMGLTP
EQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEYGSLQGIYDHIDSFKASKMKENLIND
REQAFLSKTLATINTQAPITIGLDDIVYHGPQLETLAQFYDEMDFKQLRSQMDMPKESQS
FEVSYQEVEQVTPAMFTEDDFFYFEILNDNYHVAPIIGFAWGNSDTIYASTDLSLLKQEA
FKEALTKPIKTYDFKRTKVLLSHLNQELPSARFDSRLAKYLLSTVENNELSTIARLYTDL
PLPADDEVYGKGAKRAIPDKDTLLAHLAKKVSVLLASEEPMREALSANNQDALLFEMELP
LANVLAKMEIAGISVQKESLKEMQSENEAVLERLTKDIYELAGESFNINSPKQLGQILFE
KLQLPLWATKKTKTGYSTAVDVLEKLAPISPLVSKILEYRQIAKLQSTYVIGLQDYILDD
GKIHTRYVQDLTQTGRLSSIDPNLQNIPVRLEQGRLIRKAFVPEWQDSLLLSSDYSQIEL
RVLAHISGDQHLIAAFREGADIHTSTAMRVFGIDKPEEVTPNDRRNAKAVNFGIVYGISD
YGLSNNLGITRKQAKTYIDTYFERYPGIKNYMESVVREARDKGYVETLFHRRRELPDINS
RNFNIRSFAERTAINSPIQGSAADILKVAMINLDKALTKEGLRARMLLQVHDEIVLEVPE
AELEQVKALVTKTMENAIELAVPLVADENAGATWYEAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacaagaagaaattattattgattgacggttcttccgttgctttccgtgccttt
tttgcgctttaccagcagcttgatcgctttaaaaataagtcagggctccataccaatgct
atttatggtttccacctgatgttggatcatattatgaaacgcgttgagcctactcatatt
ttagtagcttttgatgcgggcaagaccaccttccgaacagaaatgtttaaggattacaag
gcaggccgcgctaaaacacctgatgaatttcgagagcagctgcctcacattcgtgagatg
ctgacggctcttggagtgcctttctatgatttagagaattatgaggcagatgacatcatc
ggtactttggacaagatggctgaggacggcgaccagtacgaggtgaccattgtcagcggc
gacaaagatttgattcagctgacggacagcaatacagtcgttgaaatctctaaaaaaggt
gtggcagaatttgaagaatttacccctacctatctcatggaaaaaatggggctgacacca
gagcagtttattgatttaaaggctttgatgggagataagtcggataatattcctggggtc
actaaaattggggaaaaaacaggcctaaaactgctgcacgagtacggcagtcttcaagga
atttacgatcatattgacagctttaaggcttccaagatgaaagaaaatctcatcaatgac
cgagagcaggctttcttatccaaaaccttggcgaccatcaacactcaggcgccgattact
atcggtctggatgatattgtttatcacgggcctcaactggaaacattggcgcagttctat
gatgagatggatttcaaacagctccgttctcagatggatatgccgaaagaaagccagtcc
tttgaggtcagttatcaggaagttgaacaagtcacaccggctatgtttacagaggatgac
tttttctactttgaaatcctcaatgacaactaccatgtggcgccgattattggttttgcc
tggggaaacagcgacaccatctacgccagcacagatttaagtctgttgaaacaagaggcg
ttcaaagaggccttgaccaagccaatcaaaacctatgattttaagcggaccaaagtgtta
ttgagccatctgaatcaggagctcccatcagcccgatttgacagccgtctggcaaaatac
ttgctgtcaaccgttgagaacaatgaactatcgacgattgccagactttataccgacctg
cctcttccagcagatgatgaggtgtatggcaagggcgctaagcgggcaattccggataag
gataccttgctggcccatctggcgaaaaaggtcagtgtccttttagccagtgaagagccg
atgagagaggccctgtctgccaataatcaggatgcgcttctttttgaaatggagctgcct
ttggccaatgtcttagccaagatggaaattgcaggcatttcggttcaaaaagaaagtctc
aaggagatgcagtcggaaaatgaagctgttctggagcggctgaccaaggacatctacgaa
ctggcaggtgaaagttttaacatcaattcccccaagcaactaggccagattcttttcgaa
aaactccagctgcctttatgggccacgaaaaaaacgaaaacaggctattcaacagctgtc
gatgtgttggaaaaactggcgcccatatcgcctctggtgtctaaaattttggaataccgc
cagattgctaaattgcagtcaacctatgtaattggcctgcaggattatattctggatgac
ggcaaaatccatacccgctacgttcaggatttgactcagacagggcgcctgtcaagtatt
gacccgaacttgcagaatatcccagtccgtctggaacagggacgcttgattcgcaaagct
tttgttccagaatggcaagacagtctgctcttaagttccgattattcacaaatcgaactg
cgggttctagctcatatctcaggagatcaacacctgattgctgctttcagagaaggtgcc
gatattcatacctcaactgccatgcgtgtttttgggattgacaagccagaagaggtcacg
cccaatgaccgccgtaatgctaaggcagtcaactttggaattgtctatggcatttcggac
tacggtctctcgaataatctagggattacgcgcaaacaggccaaaacctatattgatact
tactttgaacgctatccgggcatcaaaaattatatggaaagcgttgtgcgtgaagcaagg
gataagggatatgtagagaccctctttcatcgccgccgtgaattgccggatatcaattcc
cgtaatttcaatattcgctcctttgctgagcggactgctatcaactccccaatccaggga
agtgctgctgatattttaaaagttgccatgattaatctcgataaggcactgacgaaagaa
ggtcttcgagcacggatgctgctgcaagtgcacgacgagattgttcttgaagtaccggag
gcagaacttgaacaagtcaaagccctcgtgacgaaaaccatggaaaatgctattgagtta
gcggtgcctttagtggcagatgaaaatgccggagcgacttggtacgaagcgaaataa
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integrated database retrieval system
