Streptococcus ferus: NCTC12278_01842
Help
Entry
NCTC12278_01842 CDS
T07132
Symbol
strH
Name
(GenBank) Beta-hexosaminidase
Organism
sfer
Streptococcus ferus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G5
Beta_helix
Gram_pos_anchor
MvcA_ins
Motif
Other DBs
NCBI-ProteinID:
SQF41240
UniProt:
A0A2X3VIM2
LinkDB
All DBs
Position
1:1789286..1794457
Genome browser
AA seq
1723 aa
AA seq
DB search
MKKLKKVKKQWVAVSIGAATSASVLAAGTVYAETPATTVSTDPGLTSVTTSSDTTASDSS
TTATTLAAETSVTTASATVSETTTTAAETTAATETSQPIMAARAAAVTSSDPLTAEDIND
EATLKANATPIIPSENQSTKINDAITTDDRTVLSQPAVPGVSYTVKYDTTNQWYYIDATD
FGLNIADNSDDTNAVALALRTANDIVMTDGSGTQYKGVAVKLSGIVNVARDQGVIDHYEV
LTYGDGIPVTPAGSIAGISNLANITPAEYATMTVDADGMTTYVNKSGVTQAGIVIPIYRQ
NGLFNQIKIDSSLSNVTALFGDGQGTTEIKTNLVQLGQPWDSNENDTDSRDHAVVLVEGI
DGFVVKDLSVNIKNLTEAFGDSHDGFYVKGMPYYGKVNAIQIDDSDNVTVESVETTGANK
AGVYVGSSYNSVSNIKLDPNSYNGKQFGTAKLRSVNYLVSNGAEGYSFDSLNLGVNNKVI
DVNSHNNRVAGVQFAYQTDFLVEGSVLSENGHKLNGSTGYGVASSAGSYNSDIIFRNNTS
TYNYRKGFDIHDGDKILIENNVSYGDRLLGISVYNRTYPMENVIIRNNVVTQDPANRLAV
NDLALDGGFSAGSDYIQYEAIHLQTNEKFRDLSAPGSVGYFEIENNTIQGLDASGKTKNG
QPYSSNAILVRMQEPYLDYVLNIDNNTITGELATSILKIFNRANDNLNRDNTQTQTDIMD
NGLGYGSGAINIRNNTVEVTTITGDADRSISPIDINDSITNNLIKDTTLNSSGNPSNVLA
YQDKFRGSLIIEDNTFKFENTNVSGKSNTVTPVSVMTNAEAIIFNNNTFDFGNVTQTYTN
NAAMQKALITVSGNNGPTIQPSSNGLETNTNTQASTLPSLLNKTQPFVFLNNDITISGIS
YGSRAPDLPIKVLTSLATIRYIDNNTFTSLSPVTAAIPKEESDSNGNTLFTTTVEKVTPT
EALNSRQFNLAVERFSTEAPALLSSTTETLYRDTVFINDPNLAAGETVVDVEGQDGTKTV
DTYIASIDNGIYDTIGDFDVNNPYPGLVRAYFKLGNVTDALDNNRVPGLVRGDYIVTAGA
NTGNILEAYKTYVYNLQKNGKTVLDAAGVPVTGSTDVTYEFANMPVALKDDTLYLYTEET
VLTDAVTRVVRVGTNTTTAAGVFDQIEIPFTTTYIDTDELLVGQTEIVTPGVNGTRTVTY
REIRDNDTGQVLSRELVSDTVTTEPTTQVIRRGTLAPTSTVERTVTSEVDYTTIYITSDE
VDKDTRIVQTPGVKGVRTIVYRDTINNVDGSVISTETVSNTVTTDPVTEVIVIGTKEPIS
TVERTVTQEIDFQTIYISSDQIENGKQEIQTPGVKGVRTIVYRDTVNKTTNIVLSSEVIS
NTVTTEPTTQIILVGTKEKEIHIEADRTVVEEIDFETVYIPTDTLDLGVQVVQTPGIKGR
RTLVFHDTINSLTNEVISSVLISETLDSQPVTQVILVGTKSTDNGPIVIERQQVEEINFE
TIYVHSDQIEYGKQVIQTPGQNGQRTVTYRDTLNKADNTIISSEIISNVVNSQPINQVIL
VGTKPITTTINRVVTETVPFDTIFITDPTLSIGTQVIQTTGQNGVRTLVYEEVYDLDNNL
ISSTLVSDNMSVQVINRIIRIGTLQTTEATPEASVSTPAKTETYRYLPASYEAVLNAPVS
PKAANPEAMLPQTGEDQNRMAIIGSVMLVAGGISLLAKKRRED
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttaaaaaaagttaaaaaacaatgggtagcagtttcgataggagctgctaca
tctgcgtctgttcttgcggcaggtactgtatatgcagaaacacctgctacaactgtaagc
acagaccctggcctcaccagtgtaaccactagcagcgacacgacagcctctgactctagt
acaacggcaacaactcttgctgctgaaacaagtgtaacaactgccagcgcaacagtttcc
gagactacgacaactgctgctgaaacaacagctgcaaccgagaccagccagccgataatg
gcggcacgcgcagcggcggttacttctagcgatccactgactgccgaagatatcaatgac
gaagcaactttaaaagctaatgcaacccctatcatccctagtgaaaaccaatcaactaaa
atcaacgatgccattactactgatgatcggactgtcctcagtcagccagctgtacctggg
gtaagctatacagttaaatatgatacaaccaaccaatggtactacattgatgccacagat
tttggcttaaatattgctgataacagcgacgatacaaacgctgttgctctggcactccga
acagctaatgacattgttatgacggatggcagcggcactcagtataaaggcgtagctgtc
aaactttctggaattgttaacgtcgctcgtgaccaaggtgttatcgatcattatgaggtt
ctcacttatggggacggtatccctgtcacacctgctggcagcattgctggtatcagcaat
ctagctaatataacacctgccgaatatgccaccatgacagttgatgccgatggcatgacc
acctatgtcaataaatccggtgttactcaggctgggattgttattccaatctatcgccaa
aacggcctcttcaatcaaattaaaattgactcaagtctatctaatgtaacggcactattc
ggagacggtcagggaacaactgaaatcaaaacaaacctagttcagctaggccagccgtgg
gacagtaacgaaaatgataccgacagccgcgaccacgctgttgttctcgttgaggggatc
gacggattcgtcgttaaagacctctctgttaatatcaaaaacttgacagaagccttcgga
gacagccatgatgggttctatgttaaaggcatgccttactatggtaaagtcaatgcaata
cagattgatgattctgataatgttactgttgaaagcgtagaaacaactggtgctaataag
gctggtgtttatgttggctcttcttacaacagtgtatctaacattaaattagatccaaat
tcttacaatggtaaacaatttggaacagctaaattacgttctgtgaactacttggtaagt
aacggagcagaaggctatagttttgacagtctaaacctcggtgtcaataataaagtcatt
gatgtcaactctcacaataaccgagttgccggggtacagtttgcttatcagaccgacttc
ttggtagaagggtctgtcctttctgaaaatggtcataaattaaacggaagtaccggatac
ggagtcgcttcttctgccggatcttacaatagtgatatcatcttccgtaacaatacatct
acctataattaccgtaaaggatttgatatccatgatggtgataaaattttaattgaaaac
aatgtctcctatggtgatcgacttctgggaatttccgtctacaaccggacttaccctatg
gaaaatgtcattatccgtaataacgttgtgactcaagacccagctaatcgtttggcagtc
aatgatttagctcttgatggtggcttctctgccggcagcgactatattcagtacgaggct
attcatctccagacaaacgaaaaattccgcgacttaagcgcacccggttctgttggatat
ttcgaaattgaaaacaataccattcagggattggatgcttctggaaaaacaaaaaatggc
caaccatactccagcaatgccattttggttcgtatgcaggaaccctatctggactatgtg
ttaaacattgacaataacaccattaccggcgaattagcgactagcatccttaaaatcttc
aatagagccaacgataatttaaatagagacaacacacaaacccaaaccgatattatggac
aatggacttggttatggttcaggtgccatcaacatccgaaacaatacggttgaggtgaca
accattactggtgatgccgatcgctcgatttcaccaattgatatcaacgactctatcacc
aataatctcatcaaggatactacgctaaatagtagcggtaacccaagcaatgtcctcgct
taccaagataagttcagaggatctctgattattgaggacaacacgttcaaatttgagaat
accaatgtcagcggtaaatcaaatacagtaacacctgttagtgtaatgaccaacgcggaa
gctattatcttcaataataatacttttgactttggtaatgtcactcaaacctacaccaat
aatgcggctatgcaaaaagcattgattaccgtttctggtaataatggtccaactattcag
ccttcatcaaatggtttagagacaaatacaaatacgcaagcatccactttgcctagtctt
ttaaataagactcagccatttgtcttcctaaacaacgacattactatttcaggtatctca
tatggctctagggctcctgatttaccaatcaaggttctaacttctcttgcgacgatacgc
tacattgataacaacacctttacttctctttctccagtgacagcggctattcctaaggaa
gaatctgatagcaacggaaatacgctttttacaacaacagtggagaaagtgacgcctact
gaggctcttaacagccgacaattcaatctggctgttgaacgcttctcaacagaagctcct
gccttgctctcttcaacgacagaaaccttatacagagatactgtcttcatcaatgaccct
aacctggctgccggtgaaaccgtggttgatgttgaagggcaggatggtactaaaactgtc
gatacttacattgctagtatcgacaatggcatctacgataccatcggagactttgatgtt
aacaatccctaccctggtttagtaagagcttactttaagctgggcaatgttactgatgct
ctggataacaaccgagttcctggtctggtacgtggggattacatcgttactgctggagca
aacactggcaacatcttagaagcttacaaaacgtatgtttataaccttcagaaaaacggg
aaaaccgtccttgatgctgccggcgtaccagtgacaggctctactgatgttacctatgaa
ttcgccaatatgcctgtcgccctaaaagatgacacgctctatctgtatacagaggaaaca
gtcctgaccgatgctgtcactcgtgttgtccgcgttggtacaaataccactacagctgca
ggtgtattcgatcagattgagattccatttaccacaacttatattgacacagatgaatta
ttagtcggtcaaacggaaatagtaacgcccggagtaaacggcaccagaaccgtaacctac
cgtgaaattcgtgacaatgacactggacaggtcctctctagagaacttgtttcagatact
gtgactaccgagccaacgactcaggtcattcgtcgtggtactttggcaccaacttcaacg
gttgaaagaaccgtaacctctgaagtggattatactaccatctacattacatctgacgag
gttgacaaagatacacggattgtacagacacctggtgtcaagggtgttagaaccatcgtt
tatcgtgataccattaataatgtagacggttctgtcattagtacggaaactgtttccaat
actgtcacaacagatcccgtgactgaagtgattgtcattggtacaaaagaacctatctca
acggttgaaagaacggtaacacaagagattgatttccaaaccatttatatttcatctgat
caaattgaaaatggtaaacaggagattcaaacacctggtgtgaaaggagtccgtaccatt
gtttaccgcgataccgttaataagacaactaacattgtcctttcttccgaagttatctct
aataccgtaacaactgagccaacgacacaaattatcttagtgggtacgaaggagaaagag
atacatatcgaggctgatcgaacagttgttgaagaaatagattttgaaaccgtctatatt
ccaacagatactctagaccttggtgtgcaggtggttcaaacaccgggtataaagggtaga
cgcacacttgtcttccatgatacgatcaacagcttaaccaacgaagtgatctcatctgtt
cttatttcagaaacacttgacagccagccagtgacacaggtaatcttagtgggtacgaaa
tcaacagataatggtccaattgttattgagcgccaacaggttgaagaaatcaactttgag
accatctatgttcactctgaccaaattgagtatggcaaacaagtgattcaaacaccagga
caaaatggccaacgcactgtgacctacagagacactttgaacaaagcagataatactatc
atctcttcagaaatcatttctaatgttgtcaacagtcagccaatcaatcaggtcattctg
gtgggaactaaaccaattacgacaacaattaatcgtgttgtcacagagaccgttcctttt
gacactatttttattactgacccaactctatcgattggaacacaagtgattcaaacaact
ggtcaaaacggtgtcagaacccttgtttatgaagaagtctatgacttagacaacaatctc
attagctcaacacttgtttctgacaatatgtctgttcaggttatcaatcgtattatccgc
atcggaaccttacagaccacagaagcaactcctgaggcatcagtttctactcctgccaag
acagagacttacaggtatctgcctgcaagttatgaggccgtattaaatgcacccgtaagt
ccgaaagcagcaaacccagaagctatgcttccacaaactggcgaggatcaaaaccgtatg
gctattatcggcagcgttatgcttgtagccggtggtattagtttacttgccaaaaaacgt
cgagaagactaa
DBGET
integrated database retrieval system
