Streptomyces ferrugineus: IM697_01880
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Entry
IM697_01880 CDS
T07428
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sfeu
Streptomyces ferrugineus
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfeu03021
]
IM697_01880
Transcription machinery [BR:
sfeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IM697_01880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
NirdL-like_HTH
MarR
HTH_3
DUF134
DUF7343
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QOV37240
UniProt:
A0A7M2SLK6
LinkDB
All DBs
Position
complement(405341..406195)
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AA seq
284 aa
AA seq
DB search
MDHEVELTVPASTAPQAPTQEDTPASPPPRSRGADTRALTQVLFGELKELTPGTPEHNRV
RGALIEANLPLVRYAAARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTV
VGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRTPTTAEIAERLRITEDEVL
SCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLVRHLLVQLPEREQRI
LLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgaggtggagttgaccgtgccggccagtactgcgcctcaagccccgacccag
gaggacacgcccgcgtccccgccgccccgcagccgcggcgccgacacccgggcgctcact
caggtcctgttcggggaactgaaggagctgacgccgggcacgccggagcacaaccgcgtg
cgcggggcgctcatcgaggcgaacctcccgctcgtgcgctacgcggccgcccgtttccgc
tcccgcaacgagcccatggaggacgtgatccaggtcggcaccatcggcctcatcaacgcc
atcgaccgcttcgacccggaccggggcgtgcagttcccgacgttcgcgatgccgaccgtc
gtcggcgagatcaagcggtacttccgcgacaacgtccgcacggtccacgtaccgcgccgg
ctgcacgagctgtgggtccaggtcaacagcgcgaccgaggacctcaccaccgccttcggg
cgcaccccgaccaccgccgagatcgccgagcggctgcgcatcaccgaggacgaggtgctg
tcctgcatcgaggccgggcggtcgtaccacgccacctcgctggaggccgcccaggagggc
gacgggctgcccgggctgctggaccggctcggctacgaggacccggccctggacggcgtg
gagcaccgcgatctggtccggcacctgctggtgcaactccccgaacgcgagcagagaatc
ctgctcctgcgctactacagcaacctcacccagtcgcaaatcagtgcggaactcggggtg
tcccagatgcacgtttcgaggctactcgcgcgtagcttccagcggctgcgttcggcgaac
cggatcgacgcgtaa
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