Streptomyces ferrugineus: IM697_11580
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Entry
IM697_11580 CDS
T07428
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu03030
DNA replication
sfeu03430
Mismatch repair
sfeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM697_11580 (dnaE)
03430 Mismatch repair
IM697_11580 (dnaE)
03440 Homologous recombination
IM697_11580 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfeu03032
]
IM697_11580 (dnaE)
03400 DNA repair and recombination proteins [BR:
sfeu03400
]
IM697_11580 (dnaE)
Enzymes [BR:
sfeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM697_11580 (dnaE)
DNA replication proteins [BR:
sfeu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM697_11580 (dnaE)
DNA repair and recombination proteins [BR:
sfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM697_11580 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QOV38961
UniProt:
A0A7M2SUI4
LinkDB
All DBs
Position
2544257..2547796
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNKTGLHNIFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGQFDEALKAAADYQD
IFGKDRYFLELMDHGIDIEHRVRDGLLEVGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEMVDTTGMFEKRD
LMPKFDIPEGYTEVTWFKEEVRRGMERRFPGGVPEDRQRQAEYEMDVIISMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIPLSGITDPQHPRYSEAGEVRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHKELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELEKNFVIFQGGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAFLKANHPAEYMAALLTSVKDDKDKSAIYLNECRRMGIRVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIKSRKAKGKYASFPDYLDKVDATACNKRTT
ESLIKAGAFDSLGHTRKGLTAHFEPMIDNVVAVKRKEAEGQFDLFGGMGEEESDEPGFGL
DVQFTDEEWEKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHRGESEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccactccgcgaagaaggcc
ggagtcaccccgatcatcgggatcgaggcatatgtcgcccccgagtcccggcgcaacaag
cgaaagatccagtggggccagccgcaccagaagcgggacgacgtctccggctccggtggt
tacacccacaagacgatgtgggccgtgaacaagacgggcctgcacaacatcttccggctc
tcctccgacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atctcgcagtggtccgaggggatcgtcgcctccaccggctgcccgtcgggtgaggtgcag
acccggttgcggctcggtcagttcgacgaggcgctcaaagcggccgccgactatcaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgacatcgagcac
cgggtccgcgacggcctgctggaggtcggcaagaagctcggcatccccccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttcaagttcgacggcaccggctactac
ctgaagtccaccgacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgctcctcgtcgccgagatggtcgacaccaccggcatgttcgagaagcgcgac
ctgatgcccaagttcgacatccccgagggctacaccgaggtcacctggttcaaggaggaa
gtccgccgcggcatggagcgccgcttccccggcggcgtccccgaggaccgccagcggcag
gccgagtacgagatggacgtcatcatctcgatgggcttccccggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggacgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgatgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaccatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctacccgtacgccatgggcgaccgcatcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctctccggcatcaccgacccgcagcacccgcgc
tacagcgaggccggcgaggtccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgcacgcggcgtggagggcctggtccggcagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagaccatcaccgagcacgtaccggtctgggtccggcacaccgac
ggcgtgaccatcacacagtgggactacccgagctgtgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcatcgacatcgacctgctgtcgctgccgctggacgaccccacgaccttcgaa
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgcctgatgaagccggacaacttcgaagacatctccgccgtctcggccctgtac
cgcccgggcccgatgggcatgaactcgcacaccaactacgccctgcgcaagaacggccag
caggagatcacgccgatccacaaggagctcgaagagcccctcaaggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctccggcgcgtcatgggcaagaagaagcccgaggaa
ctggagaagaacttcgtcatcttccagggcggcgcccgcaagaacggctacagcgacgag
gccatccaggccctgtgggacgtgctggtcccgttcgccggctacgcgttcaacaaggcg
cactcggccgcgtacggcctggtgtcgtactggaccgccttcctcaaggccaaccacccc
gccgagtacatggccgccctgctgacgtccgtcaaggacgacaaggacaagtcggcgatc
tacctcaacgagtgccgccgcatgggcatccgggtactcccgccgaacgtcaacgagtcg
gtgcacaacttcgccgcccagggcgacgacgtgatcctcttcggcctcgaggccgtacgc
aacgtcggcaccaacgtggtggagtcgatcatcaagagccgcaaggccaagggcaagtac
gcctccttccccgactacctcgacaaggtcgacgcgaccgcgtgcaacaagcgcaccacg
gagtcgctgatcaaggcgggcgccttcgacagcctgggccacacccgcaagggcctcacc
gcgcacttcgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcgggatgggcgaggaggagagcgacgagcccggcttcggactg
gacgtgcagttcaccgacgaggagtgggagaagacctatctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatcgcccagctcaccggaggcgagcacgcggacggtgcggtcgtc
accatcggcggcatcatctcgggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtggaggacctcgccggttccatcgagtgcatgttcttcccggcgacc
taccagctcgtgtcgacccaactcgtcgaggacgccgtcgtgttcgtcaagggccgcctc
gacaagcgcgaggacgtgccccggctggtcgcgatggagctccaggtccccgacctgtcg
aacgccggcaccaacgcgcccgtgatcctcaccatcccggccaccagggtcaccccgccg
atggtcagccgcctcggtgagatcctcagccaccaccggggcgagagcgaggtccgcatc
aagctccagggcccgaccaagacgacggtgctacggctggaccggcaccgtgtgaagccc
gacccggcgctgttcggcgacctgaaggtgctgctcggtccgtcctgcctggccggctga
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integrated database retrieval system
