Streptomyces ferrugineus: IM697_13190
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Entry
IM697_13190 CDS
T07428
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu03030
DNA replication
sfeu03430
Mismatch repair
sfeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM697_13190
03430 Mismatch repair
IM697_13190
03440 Homologous recombination
IM697_13190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfeu03032
]
IM697_13190
03400 DNA repair and recombination proteins [BR:
sfeu03400
]
IM697_13190
Enzymes [BR:
sfeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM697_13190
DNA replication proteins [BR:
sfeu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM697_13190
DNA repair and recombination proteins [BR:
sfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM697_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QOV39256
UniProt:
A0A7M2SSD7
LinkDB
All DBs
Position
complement(2889000..2890004)
Genome browser
AA seq
334 aa
AA seq
DB search
MLEDRTTAASSPTAWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTL
VNPERDPGPVWIHGLTSDVLEAAPLFQDIAGEFSNRLDGRVLVAHNAVFDWQMIAREYAR
AEREAPVRQRLCTIALSKELGLPLPNHKLESLAAHYGVVQQRAHHALDDARVLAEAFRPS
LRAAAAGSVRLPLQECRPLTEWRDTASTPRIGQQPSGYGGYGGYRPTSWRPSRRRPACPY
PNPGRYEDGKRLKQGMRVAFSGDTSIERDLLEDRAIEAGLHVSTSLSRLTSLLVTNDPDA
GTSKVVKARQYGTPVVDEAAFGQLLRDVEPASEQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgtacgaccgcagcgtcctcccccactgcgtggccggccgcgtatccc
cagggatacgcggtcgttgacgtggagaccaccgggctggcccgggacgaccggataatc
tccgcggccgtataccgactggacgcgcgcggcgaggtcgaggaccactggtacacgctg
gtcaacccggagcgcgacccgggtccggtctggatccacggtctgacgagcgacgtgctc
gaggcggccccgctcttccaggacatcgccggggagttctcgaaccggctcgacggccgg
gtgctcgtcgcgcacaacgcggtcttcgactggcagatgatcgcgcgggagtacgcgcgc
gcggagcgcgaggccccggtgcggcagcggctgtgcaccatcgcgctgtccaaggagctg
ggcctgccgctgcccaaccacaagctggagtcgctggccgcgcactacggcgtcgtgcag
cagcgggcgcaccacgcgctggacgacgcgcgggtgctggcggaggcgttccggccgagc
ctgcgggccgcggcggcgggcagcgtccggctgccgctccaggagtgccgaccgctcacg
gagtggcgggacaccgcctccacaccccggatcggacagcagccgagcgggtacggggga
tacggcggctaccggccgaccagctggcgcccctcccgtagaaggcccgcatgcccctat
cccaacccgggccgctacgaagacggcaaaaggctcaaacagggcatgcgggtggcgttc
tccggggacacgtcgatcgagcgcgacctgctggaggaccgcgcgatcgaggccgggctg
catgtgtcgacgagcctgtcccggctgaccagcctgctcgtcacgaacgaccccgacgcg
ggcacctcgaaggtggtcaaggcccggcagtacgggacgccggtggtggacgaggcggcg
ttcggacagctcctcagggatgtggaaccggcgtcggagcagtga
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