Streptomyces ferrugineus: IM697_19365
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Entry
IM697_19365 CDS
T07428
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IM697_19365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfeu03400
]
IM697_19365
DNA repair and recombination proteins [BR:
sfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM697_19365
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IM697_19365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_16
nSTAND1
DUF4350
AAA_22
AAA_18
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QOV40372
UniProt:
A0A7M2SVT1
LinkDB
All DBs
Position
complement(4235120..4237456)
Genome browser
AA seq
778 aa
AA seq
DB search
MYSPHDPYVRVRGAREHNLKGVDVDIPRDVLTVFTGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRSAPTSRSSVGTVTNLSNSLRMLFSRA
GDYPPGAERLDSDAFSPNTAAGACPECHGLGRVHRTAEELLVPDPALSVREGAIAAWPGA
WQGKNLRDILDALGYDVDRPWRELPAEQRQWILFTDEQPVVTVHPVRDADRIQRPYQGTY
MSARRYVMKTFSDSKSPTLRAKAERFLAAAPCPACGGSRLRPEALAVTFAGRTIAELAAL
PLTELAGTLDGRASSETARVLTEDLRSRIAPVVELGLGYLSLDRATPTLSAGELQRLRLA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLRVLERLKAAGNTVFVVEHHLDVVRGADWLV
DVGPRAGEHGGRVLHSGPVAELASVADSATARILFDDSPAAVRQVRTPRGQLKVGPVTRH
NLRGVTAEFPLGVFTAVTGVSGSGKSTLIGEITEGLAGVDRLVSVDQKPIGRTPRSTLAT
YTGLFDVVRKVFAATDDAQARGYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPC
PDCGGARYNPETLQVAYRGRNIAQVLDLTVESAAEFFADTPAVARSLGTLLDVGLGYLRL
GQPATELSGGEAQRIKLASELQRGRRGHTLYLLDEPTTGLHPADVEVLMRQLHGLVDAGH
TVVVVEHDMSVVAGADWVIDLGPGGGDAGGRIVAAGPPARVARARDSTTARYLARVMP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtactccccgcacgacccctacgtccgcgtccgcggcgcccgtgagcacaacctgaag
ggcgtggacgtcgacattccgcgggacgtgctgaccgtgttcacgggggtgtcggggtcg
gggaagtcgtcgctcgccttcggcacgatctacgccgaggcccagcgccgctacttcgag
tcggtcgcgccgtacgcgcgccggctgatccatcaggtcggcgcgccgaaggtcggcgag
atcaccgggcttccgccggccgtgtccctccagcagcgccgctcggcgccgacgtcccgc
tcctccgtcggcacggtcaccaacctctccaactccctgcggatgctgttctcccgagcc
ggggactacccgccgggcgccgagcggctcgactcggacgccttctcgccgaacacggcg
gccggggcgtgcccggagtgccatgggctgggccgagtgcaccgtacggccgaggagttg
ctggtccccgacccggcgctgtcggtccgggagggcgcgatcgccgcctggcccggtgcc
tggcagggcaagaacctgcgggacatcctcgacgcgctcgggtacgacgtggaccggccc
tggcgtgagctgcccgccgagcagcggcagtggatcctgttcaccgacgagcagccggtc
gtcaccgtccacccggtgcgcgacgccgaccgcatccaacggccgtaccagggcacctac
atgagcgcccgacggtatgtgatgaagaccttctccgactccaagagccccaccctcagg
gccaaggcggagcggttcctcgccgccgcgccctgcccggcgtgcggcggcagcaggctg
cggcccgaggcgctggcggtgaccttcgcgggccgcacgatcgccgagctggcggcactg
ccgctcacggagctggcgggcacgctggacggccgggcctcgtcggagacggcccgtgtc
ctcaccgaggacctcaggtcccgtatcgccccggtcgtcgagctcggcctcggctacctc
agcctcgaccgtgccacgcccaccctctcggcgggcgagctgcagcgcctgcgcctcgcg
acccagctgcggtccgggctcttcggtgtggtgtacgtcctcgacgagccgtcggccgga
ctgcacccggcggacacggaggcgctgctgagggtgctggagcggctgaaggccgccggg
aacacggtgttcgtggtggagcaccacctcgatgtcgtgcgcggcgccgactggctggtc
gacgtggggccgcgggccggtgagcatggcgggcgggtgctgcacagcgggccggtggcc
gagctggcgtcggtcgcggactcggccaccgcgcgcatcctgttcgacgactctcccgcc
gctgtacgccaagtgcgcaccccgcgcggccagttgaaggtcggcccggtcacccggcac
aacctgcgcggggtgacggccgagttcccgctcggggtgttcacggccgtcaccggggtc
tcggggtcgggcaagtccacgctcatcggtgagatcacggagggcctggcgggcgtggac
cggctcgtctcggtcgaccagaagccgatcgggcgtaccccgcgctccaccctcgccacc
tacaccggcctcttcgacgtcgtccgcaaggtgttcgcggccaccgacgacgcgcaggcc
cgtgggtatggcgtcgggcgcttctccttcaatgtcgcgggcggacgctgcgagacctgt
cagggcgaggggttcgtcagcgtggagctgctgttcctgccgagcacgtatgcgccgtgc
ccggactgcggcggggcgcgctacaacccggagacgctccaggtggcgtaccggggacgg
aacatcgcgcaggtgctggacctcacggtcgagtcggcggcggagttcttcgcggacacc
ccggccgtggcccgcagcctgggcaccctgctcgacgtgggcctcggctatctccgtctc
gggcagcccgccaccgagctgtccggcggtgaggcccagcgcatcaagctggcgagcgag
ctgcagcgcggccggcgcggtcacacgctgtacctgctcgacgagccgaccaccgggctc
cacccggccgacgtcgaggtgctgatgcggcagttgcacgggctcgtggacgccgggcac
accgtcgtcgtggtcgagcacgacatgtccgtcgtcgcgggcgcggactgggtgatcgac
ctggggccgggcggcggtgacgcgggcggacgcatcgtggcggcgggtccgcccgctcgg
gtggctcgcgcgcgggacagcacgacggcgcgctatctcgcccgggtcatgccgtga
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