Streptomyces ferrugineus: IM697_24425
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Entry
IM697_24425 CDS
T07428
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu00040
Pentose and glucuronate interconversions
sfeu01100
Metabolic pathways
sfeu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IM697_24425
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IM697_24425
Enzymes [BR:
sfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IM697_24425
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QOV33368
UniProt:
A0A7M2SD01
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Position
complement(5412108..5413646)
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AA seq
512 aa
AA seq
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MRRPVALRLSAASAAMALAAAVGVALSMPEASAATGYATQNGGTTGGAGGQRVRATTGTE
IHAALCGRAASSTPIIIEVEGTINHGNTAKVSGDSCNTAAGVIELKQISNVTLVGVGSGA
VFDQLGIHLRESSNIIIQDVTVRNVKKSGSPTSNGGDAIGMESDVRNVWVDHATLEASGG
ESEGYDGLFDMKDNTQYVTLSYSTLRNSGRGGLIGSSESDLSNGYVTFHHNLYENIDSRT
PLLRGGTAHIYNNHYVSLNESGINSRAGAKARVENNYFEDSKDVLGTFYTDQRGYWQVGG
NVFDNVTWSSPGSDNYPAGPNPQSNTTVSIPYSYALDAAACVPDVVSRTAGAGTGLQVSD
GNCSTQTPTSSPTAPTSPPTTTPTADPTQPSGTNLSIGAGSDGSSKADGTSYGNVRDGDM
GTYWSPAGSTGSVSVKWGSATSVSRVAIREAAGSSGVIGSWRLLNADTGAVLTSGSGAGV
ITFPQISLKKITFEITGASGTPKVAEFETYAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagaagacctgtcgcactgcgattgtccgcggcgtcggccgcgatggccctggcggcc
gcggtcggcgtcgccctgtcgatgccggaggcctcggccgcgaccggctacgcgacgcag
aacggcgggaccacgggtggagccggcgggcagagggtccgcgcgaccacgggtaccgag
atccacgcggcgctctgcggccgggccgccagcagcacgccgatcatcatcgaggtcgag
gggaccatcaaccacggcaacaccgcgaaggtgtcgggcgacagctgcaacacggccgcc
ggtgtcatcgagctgaagcagatcagcaacgtcaccctcgtcggggtcggcagcggtgcc
gtcttcgaccaactgggcatccacctgcgcgagtcgagcaacatcatcatccaggacgtg
acggtccggaacgtgaagaagtccggctcgcccacctccaacggcggcgacgccatcggc
atggagagcgacgtccgcaacgtctgggtcgaccacgccaccctggaggcgtccgggggc
gagtcggagggctatgacggcctgttcgacatgaaggacaacacgcagtacgtgacgctg
tcgtacagcacgctgcgcaactccggccgaggcggcctgatcggttccagcgagagcgat
ctgtccaacgggtacgtcaccttccaccacaacctctacgagaacatcgactcccgaacc
cccctgctgcgcggcgggacagcccacatctacaacaaccactacgtcagcctgaacgag
tccggcatcaactcacgggccggagccaaggcaagggtggagaacaactacttcgaggac
tccaaggacgtcctgggcaccttctacacggaccagcgcggctattggcaggtcggcggc
aacgtcttcgacaacgtcacatggtccagccccggaagcgacaactaccccgcgggtccg
aacccccagtccaacaccacggtgagcatcccctactcctacgcgctcgacgccgccgcg
tgcgtccccgacgtcgtgagccggaccgcgggcgcgggcaccggtctgcaggtgtccgac
ggcaactgctcgacacagacgccgacttccagcccgacggctcccacgtccccgcccacc
accacacccacggcggatccgacccagcccagcggcaccaacctcagtatcggcgccggc
tccgacggctccagcaaggccgacggcaccagctacggcaatgtccgtgacggggacatg
ggcacgtactggtcaccggccggctcgacggggtcggtctccgtcaagtggggttcggcg
acgtcggtatcgcgcgtcgccatccgggaggcggccggctcctcgggggtcatcggctcc
tggcggctgttgaacgcggatacgggtgcggtgctcaccagcggcagcggtgcgggcgtc
atcacgttcccgcagatctcgctgaagaagatcacctttgagatcaccggggcctccggc
actccgaaggtggccgagttcgagacctacgcctcgtag
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