Streptomyces ferrugineus: IM697_29985
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Entry
IM697_29985 CDS
T07428
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sfeu
Streptomyces ferrugineus
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfeu03021
]
IM697_29985
Transcription machinery [BR:
sfeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IM697_29985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_23
HTH_24
GerE
HTH_Crp_2
MarR
MarR_2
HTH_28
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
QOV34346
UniProt:
A0A7M2SDF4
LinkDB
All DBs
Position
complement(6675948..6676739)
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AA seq
263 aa
AA seq
DB search
MPTSVSAKHHPHDDAPDTADDFRRLASLPEGQQRDTVRERIVEAWLPMADRLAGRFRSRG
ESFEDLRQVAALGLVKAVDRYDPERGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRFAVQDLQTVSGRRPSAAEIAEHADMSEADVRVGLEALESFTALSLDAELPGSDD
GYSLSDALGSADPALDTVVDREAVKPRIAALPERERAILYMRFFGDMTQSRIAEQLGISQ
MHVSRLISRCCHRVREQVLSDVA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcccacttcagtgagcgcgaagcaccacccgcacgacgacgcccccgacaccgccgac
gactttcgcaggctcgcctcgctgcccgaggggcagcagcgcgacaccgtccgcgaacgg
atcgtcgaggcctggctgcccatggccgaccggctcgccggccggttccgcagccgtggc
gagagcttcgaggacctgcgacaggtcgcggcgctcggcctggtcaaggccgtcgaccgg
tacgaccccgagcgcggcaacgccttcgagagctacgccgtgcccaccatcaccggcgag
atcaagcggcacttccgcgaccacatgtggacgctgcacgtgccgcgccgggtgcaggac
ctgcgcaaccgtgtgcggttcgccgtacaggacctgcagaccgtctcgggccgcaggccc
agcgcggccgagatcgccgagcacgcggacatgagcgaggccgatgtccgcgtcgggctc
gaggcgctggagagtttcaccgccctgtcgctggacgcggagctgcccggcagcgacgac
gggtactcgctgagtgacgcgctggggtcggccgaccccgcgctggacacggtcgtggac
cgtgaggccgtcaagccgcggatcgccgcgctgcccgagcgggagcgggcgattctgtac
atgcggttcttcggggacatgacgcagagcaggatcgcggagcaactggggatctcgcag
atgcatgtgtcccggctcatcagccggtgttgtcaccgggtgcgcgagcaggttctgagc
gacgtggcctga
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integrated database retrieval system
