Streptomyces ferrugineus: IM697_34050
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Entry
IM697_34050 CDS
T07428
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM697_34050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfeu03019
]
IM697_34050
03400 DNA repair and recombination proteins [BR:
sfeu03400
]
IM697_34050
Enzymes [BR:
sfeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM697_34050
Messenger RNA biogenesis [BR:
sfeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IM697_34050
DNA repair and recombination proteins [BR:
sfeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IM697_34050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QOV35067
UniProt:
A0A7M2SFF1
LinkDB
All DBs
Position
7629570..7631735
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AA seq
721 aa
AA seq
DB search
MEHTSNADLRAAADAVLARLVGDATGTARLREDQWRAIEALVADRRRALVVQRTGWGKSA
VYFVATSLLRSRGSGPTVIVSPLLALMRNQVEAAARAGIHARTINSSNTEEWDTIQNEIA
TGDVDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPPGVPVLATTATANARVTADVAEQLGTGGSSDALVLRGPLDRDSLSLNVLRLPDAAH
RMAWLADHLDELPGSGIIYTLTVAAAEEVTAFLRHSGHTVASYTGKTENADRQQAEDDLL
GNRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGPE
DEAIWQYFASLAFPSEDLVRRTLDVLARADRPMSLPALEPLVELRRSRLETMLKVLDVDG
AVRRVKGGWIATGQPWMYEAERYDWVARQRKAEQQAMREYASTTGCRMEFLQRQLDDEGA
KPCGRCDNCAGARFAADTSTAALDAARVDLGRAGVEVEPRRMWPTGLPAIGVELKGRIPA
GEQAAPGRALGRLSDIGWGNRLRPMLAPHAPDGPVPDDVAKAVVGVLVDWAKGPDGWASG
AQDASPRPVGVVTVASRTRPQLINSLGARIAEIGRLPLLGSLEYTGEAPSVSRSNSAQRL
KSLDGALTVPPALASALAETPGPVLLVDDFTETGWTLAVAARMLRRTGAQGVMPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacgcggatctccgggcagccgccgacgcggtcctcgcccgtctc
gtcggagacgccaccggcacggcgcgactgcgcgaggaccagtggcgggcgatcgaggcg
ctggtcgccgacagacgccgtgctctcgtggtgcagcgcaccgggtggggcaagtccgcg
gtctacttcgtggccacgtctttgctgcggtcccgaggcagcggcccgaccgtgatcgtc
tcgccgttgctcgcgctcatgcgcaaccaggtcgaggccgccgcccgggccggcatccat
gcccgcaccatcaactcctccaacaccgaggagtgggacacgattcagaacgagatcgcc
accggcgacgtcgacgtgctgctggtctccccggagcgcctcaacaacccggacttccgc
gaccaggtgctgcccaagctggccgcggcgaccggccttctcgtggtggacgaggcacac
tgcatctcggactggggccacgacttccggccggactaccggcggctgcgcaccatgctc
gccgatctgccgcccggggtgcccgtactggcgaccaccgccaccgccaacgcccgcgtg
acggccgacgtcgccgaacagctcggcacaggcggcagctcggacgccctggtgctgcgc
ggcccgctggaccgggacagcctcagcctgaacgtgctgcgactgccggacgccgcacac
cggatggcctggctcgccgaccacctcgacgaactgccgggctcgggcatcatctacacg
ctcaccgtggccgccgccgaggaggtcacggccttcctgcggcatagtggccacacggtc
gcctcctacaccggcaagacggagaacgccgaccgtcagcaggccgaggacgacctgctc
ggcaacagggtcaaggccctggtcgccacctccgccctcggtatgggattcgacaaaccc
gacctcggcttcgtggtgcatctgggttcgccctcctcccccatcgcctactaccagcag
gtcggccgcgccggacgcggcgtcgagcacgccgaggtgctcctcctccccggaccggag
gacgaggcgatctggcagtacttcgcctcgctcgccttcccctcggaggacctggtgcgc
cgcacactcgacgtcctcgcacgtgcggacaggcccatgtcgctgcccgcactggaaccc
ttggtggaactgcgtcgctcccgtctggagaccatgctcaaggttctggacgtggacggc
gcggtccggcgggtcaagggcggctggatcgccaccgggcagccatggatgtacgaggcc
gagcgctacgactgggtcgcccggcagcgcaaggccgagcagcaggcgatgcgcgagtac
gcctcgacgacgggctgccggatggagttcctccagcgccagctcgacgacgaaggggcc
aagccctgcggtcgctgcgacaactgcgcgggcgcccgcttcgccgccgacacgtccacg
gccgcgctggacgccgcgcgcgtcgacctcggccgagcgggagtcgaggtcgagccacgc
cgcatgtggccgaccggccttccggcgatcggcgtcgagctcaaaggacgtatcccggcc
ggcgaacaggccgcacccggaagggcgttggggcggctgtcggacatcggctggggcaac
cggctgcggccgatgctcgcgccccacgccccggacggacccgtgcccgacgacgtggcg
aaagcggtcgtgggcgtcctggtcgactgggccaagggccccgacggctgggcctccggc
gcgcaggacgcctcaccgcgccccgtcggcgtggtcacggtcgcctcacgcacacgcccg
cagttgatcaactcgctgggcgcgcgcatcgcggagatcggcaggcttccgctgctgggt
tcccttgagtacacgggagaggcaccctcggtgtcccgaagcaacagcgcccagcggctg
aagtccctcgacggcgcgctgaccgtgcctcccgccctggcctcggccctcgcggagact
cctggtccggtactgctggtcgatgacttcacggagaccggctggaccctcgccgtcgcg
gcccgcatgctccgccgcacgggcgcacagggggtgatgcctctggtcctggcggttcag
ggttga
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