KEGG   Streptomyces ferrugineus: IM697_34430
Entry
IM697_34430       CDS       T07428                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sfeu  Streptomyces ferrugineus
Pathway
sfeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IM697_34430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfeu03019]
    IM697_34430
Messenger RNA biogenesis [BR:sfeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IM697_34430
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QOV35133
UniProt: A0A7M2SI55
LinkDB
Position
complement(7724180..7725865)
AA seq 561 aa
MSHPHPELSPPSPLPEGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFSSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGHRERIGPFDCEFVAVNHSIPDALAVAIRTPAGLVVHTGDFKMDQLP
LDNRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFTPHERDISNVLRQVFAGARKRVIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPD
SEVVLVCTGSQGEPMAALSRMANRDHQIRIVEGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICRPRNLMPVHGEWRHLRANAELGALTGVPHD
RIVIAEDGVAVDLIEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFV
VVDSSTGKITGGPHIQARGSGIEDSAFGDVIPKITEVLERSAQDGVVEPHQLQQLVRRTL
GKWVSDTYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcatcctgaactcagcccgccgtcgccgctccccgaaggcggcctgcgg
gtcaccccactcggcggtctcggcgagatcggccggaacatgacggtcttcgagtacggc
ggccgcctgctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggaatc
gacctgatcctgccggacttctcgtccatcagagaccgcctcgacgacatcgagggcatc
gtcctcacccacggccacgaggaccacatcggcggcgtccccttcctcctccgcgagaag
ccggacatcccgctgatcggctccaagctgaccctcgccctcatcgaggccaagctccag
gaacaccgcatccgcccgtacaccctcgaggtggcggaggggcaccgcgagcgcatcggc
cccttcgactgcgagttcgtcgcggtcaaccactccatcccggacgccctggccgtggcg
atccgcacgcccgccggcctggtggtccacacgggcgacttcaagatggaccagctcccg
ctggacaaccgtctgacagatctccacgcgttcgcacggctgagcgaggaaggcatcgac
ctcctcctctccgactccacgaacgcggaggtcccgggcttcaccccgcacgagcgcgac
atctccaacgtcctgcgccaggtcttcgcgggcgcccgcaagcgcgtcatcgtggcgagc
ttcgccagccacgtccaccgcatccagcagatcctggacgcggctcatgaatacggacgc
cgggtcgccttcgtgggccgctcgatggtccgcaacatgggcatcgcacgagacctgggc
tacctgaaggtcccaccgggcctcgtggtggacgtcaagacactggacgacctcccggac
agcgaggtggtcctggtctgcacgggctcccagggcgaaccgatggcggccctgtcccgc
atggccaaccgcgaccaccagatccgcatcgtagagggcgacacggtgatcctcgcctcg
tccctcatccccggcaacgagaacgcggtctaccgcgtcatcaacggcctgacccgctgg
ggcgcgaacgtcgtccacaagggcaacgccaaggtccatgtctcgggccacgcctcggcc
ggcgaactgctgtacttctacaacatctgccgcccgagaaacctgatgcccgtgcacggc
gaatggcgccacctgcgcgccaacgccgaactgggcgccctcaccggcgtcccgcacgac
cgcatcgtcatcgccgaggacggcgtcgccgtcgacctcatcgagggcaaggcgaagatc
tccggcaaggtgcaggccggctacgtgtacgtcgacggcctctcggtcggcgacgtgggc
gagccggcgctgaaggaccgcaagatcctcggcgacgaaggcatcatctcggtcttcgtg
gtggtggactcctccaccggcaagatcacgggcggcccgcacatccaggcccgcggctcc
ggcatcgaggactccgccttcggggacgtcatcccgaagatcacggaggtactggagcga
tcggcccaggacggtgtggtcgagccgcaccagctccaacagctggtgcgccggaccctc
ggcaagtgggtctcggacacgtaccgacgcaggccgatgattctgcctgtggtggtggag
gtctga

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