Streptomyces ferrugineus: IM697_36585
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Entry
IM697_36585 CDS
T07428
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM697_36585 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfeu03021
]
IM697_36585 (rho)
03019 Messenger RNA biogenesis [BR:
sfeu03019
]
IM697_36585 (rho)
Transcription machinery [BR:
sfeu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IM697_36585 (rho)
Messenger RNA biogenesis [BR:
sfeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IM697_36585 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOV35527
UniProt:
A0A7M2SGP4
LinkDB
All DBs
Position
complement(8217982..8220012)
Genome browser
AA seq
676 aa
AA seq
DB search
MSDTTDLMGARVEETAAAPATDASAPATGAGSRRRRGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGAPSGGAGAASAKAETATETKPKRRTTSRARTGDEAAAEKKA
AKAAEAPAEKAAAQQQIEIPGQPASDDAPAERRRRRATADAGSPAGAPETIAAEAKNEPK
AETPAQPQAQQGEAKGEGRSEAKGDAGEGGEGRRRDRRERGRDRDRDRDRRKGDDQQGGQ
RGQQQNQQQGGGRQDRGQRADEDGDDFEGGRRGRRGRYRDRRGRRGRDDVQEPQIAEDDV
LIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHITGAVRQPKEGERR
EKFNALVRLDSVNGMAPEHGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIGK
GQRGLIVAPPKTGKTMIMQAIANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVISS
TFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVD
STALYPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEEFKGTGNAELKLDRKLA
DKRIFPAVDVDASGTRKEEILLGNEELAIVWKLRRVLHALDQQQAIELLLDKMKQTKSNA
EFLLQIQKTTPMPNGD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcacgtgtcgaggagaccgctgccgcgcccgcc
acggacgcctccgcgcctgccaccggtgccggctcccggcggcgccgcggtaccggcctc
gagggcatggtgctggccgagctgcagcaggtcgcatccggcctcggcatcaggggcacc
gcgcgcatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggctgggggtgcc
ccctctgggggagcgggtgcggcctcggcgaaggccgagaccgccaccgagaccaagccg
aagcgccgcaccacctcccgcgcccgcacgggcgacgaggccgccgccgagaagaaggcg
gcgaaggccgctgaggctcccgccgagaaggccgcggcccagcagcagatcgagatcccc
ggtcagccggcgagcgacgacgccccggccgagcgccgccgtcgccgcgccaccgccgac
gcgggcagccccgcgggcgcgcccgagaccatcgccgccgaggccaagaacgagcccaag
gccgagacgcccgcgcagccgcaggcccagcagggcgaggccaagggcgaaggcaggagc
gaggccaagggcgacgccggtgagggcggcgagggccgccgtcgcgaccgccgtgagcgc
ggccgggaccgcgaccgggaccgcgaccgccgcaagggcgacgaccagcagggcggccag
cgcggccagcagcagaaccagcagcagggcggcggccgtcaggaccgcggccagcgggcc
gatgaggacggggacgacttcgagggcggccgccgtggccgtcgcgggcgttaccgcgac
cgccggggccgtcgcggccgcgacgacgtgcaggagccgcagatcgccgaggacgacgtc
ctgatccccgtcgcgggcatcctggacatcctcgacaactacgccttcatccgtacgtcg
ggctacctgcccggtccgaacgacgtgtacgtctccctcgcccaggtccgcaagaacggc
ctgcgcaagggcgaccacatcaccggtgcggtccgtcagcccaaggagggcgagcggcgc
gagaagttcaacgcgctggtgcggctcgactccgtcaacggcatggcgcccgaacacggc
cgtggccgaccggagttcaacaagctcaccccgctgtacccgcaggaccggctccgcctg
gagaccgacccgggcgtgctgaccacccgcatcatcgacctcgtgtcgccgatcggtaag
ggccagcgcggtctgatcgtggccccgccgaagaccggcaagaccatgatcatgcaggcg
atcgccaacgcgatcacccacaacaaccccgagtgccacctgatggtcgtcctggtcgac
gagcgtccggaagaggtcaccgacatgcagcggtcggtcaagggcgaggtcatctcctcg
accttcgaccgcccggccgaggaccacaccacggtcgccgagctcgccatcgagcgcgcc
aagcgtctggtggagctgggccacgacgtggtcgtgctgctcgactcgatcacgcgtctg
ggccgtgcctacaacctggcggcgcccgcctccggccgcatcctgtccggtggtgtcgac
tcgaccgcgctgtacccgccgaagcgcttcttcggcgcggcgcgcaacatcgaggacggt
ggctcgctcaccatcctggcgacggctctcgtcgacaccgggtcccgcatggacgaggtg
atcttcgaggagttcaagggcacgggcaacgccgagctcaagctcgaccggaagctcgcc
gacaagcgcatcttcccggcggtggacgtcgacgcgtccggtacccgtaaggaagagatc
ctgctgggcaacgaggagctcgccatcgtctggaagctgcgccgggtgctgcacgcgctc
gaccagcagcaggcgatcgagctgctgctcgacaagatgaagcagacgaagtcgaacgcc
gagttcctgcttcagatccagaagacgacgccgatgcccaacggcgactag
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