Streptomyces ferrugineus: IM697_40800
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Entry
IM697_40800 CDS
T07428
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IM697_40800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfeu03021
]
IM697_40800
03400 DNA repair and recombination proteins [BR:
sfeu03400
]
IM697_40800
Enzymes [BR:
sfeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IM697_40800
Transcription machinery [BR:
sfeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IM697_40800
DNA repair and recombination proteins [BR:
sfeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IM697_40800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
QOV36278
UniProt:
A0A7M2SLD8
LinkDB
All DBs
Position
complement(9203296..9207195)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDSEMRNVKGE
DRSFASVAEAIMAFDAGELSLQSKIDIRFPVGTIPPRGWTPPAQEEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNDNFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLAIAERG
ADGVLRKADNAETSVYARCLAEDIVVDGKVLAPAGVDLGDVLIDQLVAAGIETVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAQGRVRIEETEKTKKIVVTPDDGSDETAFPISKRARL
LVSEGEHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFEHENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgtccccagccggctgggctacctgctcgacctg
gctcccaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gaggagcgccgtacccgcgacctgccctccctggaggcgcacgtctcggtcgagcgccag
cagatcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgtgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggacccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgggaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagaagctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctgaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggtgctggactgcgtgccggtcatc
ccgccggaccttcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccggaacaaccgactgaagcgccttctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgtcgtggccgtccggtcaccggtcccggtaaccgcccgctgaag
tccctcagcgacatgctgaagggtaagcagggtcgattccgtcagaacctgctcggtaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctgaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gctcccaccctgcaccgccttggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtgtgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggtcgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccacggactccgagatgcggaacgtgaagggcgag
gaccgctccttcgcgtccgtggccgaggcgatcatggccttcgacgcgggcgagctctcg
ctccagtcgaagatcgacatccgcttcccggtcggcaccatcccgccgcgcggctggacc
ccgccggcgcaggaggagggtgagccggagtggcagcagggtgactcgttccggctgcgg
acgaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttctactgggcgacc
cgttccggtgtcaccgtcgccatctccgacgtcgtcgttcccgaggcgaagaaggagatc
gtcaagggctacgaggcacaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgacaacttcccgaagaccaacccgatcttcatgatggtgaactcg
ggtgcacgaggcaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagacgatcccgcgtccgatcaaggcgtcgttccgtgagggcctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtgtcgcaggacgtcatc
atccgcgaggaggactgcggcaccgaccgcggcctcaagctggccatcgcggagcgcggc
gccgacggcgtcctgcgcaaggcggacaacgccgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtcgtggacggcaaggtgctcgccccggcgggcgtcgacctcggtgac
gtcctcatcgaccagctggtcgccgccggcatcgagacggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggcacctgcgccatgtgctacggccgctcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcccagggccgcgtccggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcgttcccgatctcgaagcgcgcccgactc
ctggtcagcgagggcgagcacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggccagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgtgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggtgagctggtcgagcgctcgaagttcgagcacgagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcagctcatgggtatcaccaaggcctcgctggccacg
gagtcctggctgtcggcggcgtccttccaggagacgacgcgagtcctcacggacgcggcg
atcaacgccaagtccgactcgctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
accggttccggccaggccgttccgctggaggactacgactatggtccgtacaaccagtaa
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integrated database retrieval system
