Mammaliicoccus fleurettii: FOB90_01765
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Entry
FOB90_01765 CDS
T06358
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sff
Mammaliicoccus fleurettii
Brite
KEGG Orthology (KO) [BR:
sff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sff03019
]
FOB90_01765
03009 Ribosome biogenesis [BR:
sff03009
]
FOB90_01765
Enzymes [BR:
sff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOB90_01765
Messenger RNA biogenesis [BR:
sff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOB90_01765
Ribosome biogenesis [BR:
sff03009
]
Prokaryotic type
rRNA helicases
FOB90_01765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGS45507
LinkDB
All DBs
Position
complement(351686..353026)
Genome browser
AA seq
446 aa
AA seq
DB search
MANHPFDQFRFDSNLIEAIKSLNFKQPTEIQQRVIPKIMKRVNLIGQSQTGTGKSHAFLL
PLFQQIDSTYEEPQAIIVAPTRELATQLYQAAQHLSQFKTNVKVSLFIGGTDFEKDKQKT
TVQPQLVIGTPTRINDLAKSGALHVHLANYLVVDEADLMIDLGLIEDVDQIASKLDEQAK
MAVFSATIPKTLYPFLNKYLEQPEFIEVKSESKNKKSIEFFLIPTKGAQKIDKTVSLIEL
LNPYLAIIFCNSRDSADALASELQQQGIQVGMIHGGLSPRERKQQMKRIRNLDYQYVIAS
DLASRGIDIEGVSHVINFDVPKDIDFFTHRVGRTGRGNYKGIAITLYTPEEEELIQLIEQ
KGYQFENVDIKNGELKPIKAHNTRKLRQKQDDHITQQVKHKVKRNNKKKVKPGYKKKYKQ
ELEQIKRQVKRQFSRSKKRQARKNKR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcatccatttgaccaatttcgttttgattcaaacttaattgaagcaattaaa
tcattaaattttaaacaacccactgaaatacaacaacgtgtgattccaaaaataatgaaa
cgtgtaaatctgattggtcaatcacaaacgggtacagggaaatcacatgcatttctttta
ccattattccaacaaattgattccacatacgaggaaccacaagccattatcgttgcacca
acacgtgagttagcaacacaactttaccaagctgcgcaacaccttagtcaatttaaaact
aatgtaaaagtaagcttgtttattggtggaactgattttgaaaaagacaaacaaaagaca
acggttcaaccccaattggtgattggtacaccaacgcgcataaacgatctcgctaaatcg
ggtgcgctacatgttcacttagcaaattatttagttgtagatgaagctgatttaatgatt
gatttaggtctcatcgaagacgtggatcaaatcgcgtctaaacttgatgaacaagcaaaa
atggctgtttttagtgctacaattcctaagacattatatccatttttaaataaatattta
gagcaaccagaatttatcgaagttaagagtgaatcgaaaaataaaaagagtattgaattc
ttccttattcctacaaaaggtgcacaaaagatagataaaaccgtttcacttattgaactt
ttaaacccttatctcgcgataatattttgtaatagtagagatagtgcagatgcgctcgca
agtgagttgcagcaacaaggtattcaagtcggtatgattcatggtggcttgtctcctcgc
gaacgtaaacaacaaatgaagcgaatccgaaacttagattatcaatatgtaatcgcaagt
gatttagcttcaagaggaatcgacattgaaggagttagtcacgtcattaattttgatgta
cctaaagacattgacttctttacacatcgtgttggaagaacaggacgcggtaattataag
ggcattgcaattacactttatacacctgaagaagaagaactgattcaattaattgaacaa
aaaggctatcagtttgaaaatgtagatattaaaaatggtgaattaaaacctatcaaagcg
cacaatacaagaaagctacgtcaaaaacaagatgatcacattacgcaacaagtaaaacat
aaagtgaaacgtaataataagaaaaaagttaaaccaggctataagaaaaaatataagcaa
gagctcgagcagattaaacgccaagtaaaaagacagtttagcagaagtaaaaaacgtcaa
gctagaaagaataaaagataa
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