Mammaliicoccus fleurettii: FOB90_02150
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Entry
FOB90_02150 CDS
T06358
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sff
Mammaliicoccus fleurettii
Pathway
sff03410
Base excision repair
sff03430
Mismatch repair
sff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOB90_02150 (recJ)
03430 Mismatch repair
FOB90_02150 (recJ)
03440 Homologous recombination
FOB90_02150 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sff03400
]
FOB90_02150 (recJ)
DNA repair and recombination proteins [BR:
sff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FOB90_02150 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FOB90_02150 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FOB90_02150 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF1424
DSPc
Motif
Other DBs
NCBI-ProteinID:
QGS45583
LinkDB
All DBs
Position
complement(427562..429844)
Genome browser
AA seq
760 aa
AA seq
DB search
MIQSNFQWQTRQVDSLIDDALVDKYKLTPMMKSILESKGYTDGLELERILAPNHLIHDPQ
ALSDMDKAISRIHKAIQNGEKILVYGDYDADGVTSTTIMVKTLQQLGATVGWYIPNRFTE
GYGPSEMAFRNAYDEGVTLIITVDNGIQGHHEIELVQNLGVDVIVTDHHEMGETLPPAFA
IIHPMHPDFNYPFKYLCGAGVAFKLADMLLEELPHSFWVLAMIGTIADLVSLTDENRMIV
QKGLTYINEETPVAIRTLLDQAQYRDDINEETIGFIIAPRLNAVGRLDDAGLAAELLMSD
DPEESLFLAEQVEHFNVERKEIVQQIVEEAMEMAQEAVSEGQKFLVLAKENWHEGVLGIV
ASRIVETFHLPTMILNIDEAQQHAKGSSRSISQVSMFEALSSESTLITKFGGHHMAAGLT
MPIENVDQLRNALNTWMTERFNDDDLQPVKMVNVVLNIEHVTIEQIRSLERLRPFGMDFN
RPVFQIDGLTIQQAKAIGQNQNHLKVTFNEQNLQGLFWNHGELNQELMEDQEIDIIGELQ
INEWNGNRTPQFVMTDVRSNDRQILDYRSKNKRLPRFEGKDQVCYLIHPNKDKSSHHEFY
YGEVIPEGYDKCVMRDLPLTMEDIKLSCRYIKASQIYLVFEHQHSIYFEGLPKDDTFKKC
YKALFQKGKTNLETEGMALSQYLQIKPAMLKFILKVFLDLQIISQKDGIIEIAHSREKQS
ISASRIYQARVQRIEVEKQLLYEEFDAIKSWFVNELAGIE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgatacaatcgaattttcaatggcaaacgcgtcaagttgatagcttgattgatgacgct
ttagtcgataaatataaattgacaccgatgatgaaatcgatactagaaagcaaagggtac
actgatggattagagcttgaacgcattttagcaccgaatcatttgatacatgaccctcaa
gcattaagtgacatggataaagcgatatcacgcatacataaagcaattcaaaatggtgaa
aagattcttgtttatggagactatgatgcagacggtgtaacgtcaacgaccattatggtt
aaaacattgcaacaacttggtgctactgtagggtggtatatccctaaccgatttacagaa
ggatatgggccaagcgaaatggcctttagaaatgcctatgatgaaggagttacgttaatt
attactgttgataatggtatacaagggcatcatgaaattgaacttgtgcaaaatctaggc
gtggatgtgattgttacagaccatcatgaaatgggggaaacgttgcctcctgcttttgca
attatccatccgatgcatcctgatttcaattatccatttaaatatttatgtggtgcaggt
gtggcgtttaagttagcagatatgcttttagaagaattgccacattcattttgggtttta
gcaatgattgggacaattgctgatttagtttctttgactgatgaaaatcggatgattgtt
caaaaaggattgacttatatcaatgaagagacacccgtggcgattcgcactttattagat
caggcacaataccgagatgatattaatgaagaaacaattggttttatcattgcgcctcga
ttaaatgcggtaggccgtttagacgatgcaggtttagcggctgaattattaatgtcagat
gatccagaagaatcgctatttctagcagaacaagtggaacatttcaatgtggaacgtaaa
gaaattgtccaacaaatcgtggaggaagcgatggagatggctcaagaagccgttagtgag
ggccaaaaatttttagttttagctaaagaaaattggcacgaaggcgtattaggaattgtg
gcttcaagaattgttgaaacatttcatttgcctactatgattttaaatattgatgaagcc
caacaacatgcaaaaggttcatcccgaagtatttcgcaagtctcaatgtttgaagctcta
tcttcggaatctacattaattacaaaatttggtggtcaccatatggctgcaggattaaca
atgccgatagaaaatgtagatcagctaagaaacgcgctaaatacatggatgactgaacgt
tttaatgacgatgatctacaacccgtcaaaatggttaatgttgttttaaatatcgaacat
gtaacgattgaacaaatccgctctttagaacggttacgcccttttggcatggattttaac
agacctgtatttcaaattgatggcttgaccatccaacaagcgaaagcgattggtcaaaat
cagaatcatcttaaagttacttttaatgaacaaaatttacaaggcttgttttggaatcat
ggtgaattaaaccaagaattaatggaagaccaagaaatagatatcattggtgaacttcaa
attaatgaatggaatgggaatcgtacgcctcaatttgtaatgactgatgtaagaagtaat
gatcgacagattttagattatcgcagcaaaaataagcggttacctcgatttgagggtaaa
gatcaagtgtgttatctgatacatccaaataaagataaatctagtcatcatgaattctat
tatggcgaggtcattccagaaggttatgataaatgtgtaatgagagatttaccacttact
atggaagatataaagctgtcatgtcgttacattaaagcatctcaaatttatcttgtattt
gagcatcaacattctatttattttgaaggtttaccgaaagatgatacgtttaaaaaatgt
tataaagcactatttcaaaagggtaaaacaaatctagaaactgaaggtatggcactgagt
caatatttgcaaattaaacccgctatgctgaaatttattttaaaagttttcttagactta
caaattatttcacaaaaagatggtataattgagattgcgcattctcgtgaaaagcagtct
atttcagctagtcgcatttatcaagcacgggtacagcgaattgaagttgaaaaacagctc
ttatatgaagaatttgatgccattaagtcttggtttgttaatgaattagcagggattgaa
tga
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