Mammaliicoccus fleurettii: FOB90_02425
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Entry
FOB90_02425 CDS
T06358
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sff
Mammaliicoccus fleurettii
Pathway
sff03030
DNA replication
sff03430
Mismatch repair
sff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOB90_02425 (dnaE)
03430 Mismatch repair
FOB90_02425 (dnaE)
03440 Homologous recombination
FOB90_02425 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sff03032
]
FOB90_02425 (dnaE)
03400 DNA repair and recombination proteins [BR:
sff03400
]
FOB90_02425 (dnaE)
Enzymes [BR:
sff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOB90_02425 (dnaE)
DNA replication proteins [BR:
sff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOB90_02425 (dnaE)
DNA repair and recombination proteins [BR:
sff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOB90_02425 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QGS45636
LinkDB
All DBs
Position
complement(489948..493136)
Genome browser
AA seq
1062 aa
AA seq
DB search
MVAHLNIHTSYELLNSSITIKGAIARAIELGYSAIAITDLNVMYGVPQFYDECTKKGIKP
LLGMTVYITDQLNVLEVVLIAKNNEGLKNLFQLSTDIQVNQREQVSIYDIQAYLQHNVVI
FKNMTEQTLHWLDEIPIESSYYVNHHSVVDHAIPRVYLESAFYLKPEDKDTLKVLNAIRD
NTKVNFVDNEDGPSRHMFTINELSEAEINAQYVNATDEVADLCEAKLEYHQALLPEFQTP
DGSSADHYLWRVLEKSLQNMGLSKPDYMERLKYEYQVITKMGYADYFLIVSDLIRYAKSN
GVMVGPGRGSSAGSLVSYLLNITTIDPLKYDLLFERFLNPERVTMPDIDIDFEDTQREKV
IQYVQNKYGDYRVAGIVTFGHLLAKAVARDVGRVMGFDETTLSEASKLIPSKLGVTLDEA
YAQENFKAFVHRNHRNERWFEFCKKLEGLPRNTSTHAAGVIVNDQPLYESIPLTEGDTGL
LTQWTMTEAEKIGLLKIDFLGLRNLTIIHQIIKQIKHDMKIDLNIEEIPFDDKEVFRLLS
KGETTGIFQLESDGVRRVLQKLQPEHFEDIVAVTSLYRPGPMEEIPTYIRRRHDPSQVQY
LHPDLEPILKRTYGVIIYQEQIMQIASQFAGFSYGEADILRRAMSKKNREVLENERQHFM
DGAMKKGYANALSSQIFDLILKFADYGFPRAHAVSYSKIAYIMTYLKVHYPTYFYANILS
NVIGNEAKTQLMIQEAKQQQIKIHGPHINWSQWRYVATQKGVYISLGAIKGIGYQSVQAI
VSERIEHGPFKDFFDFCDRIPNRIRTRRLLEALILTGALDCFDKNRATLLQSIDKVTDSN
SDIDQSFVDTFATIKRDYLETEEMPEQQLSDYEKQYLGFYVSMHPVEKQFVKKQYLGIYQ
LNSKLINQPILVTMDAIRVIRTKQGQQMAFVELNDGEHTVDGVIFPKVFQSFAELIQENA
YYIVWGKFEKRNEKMQMIIQKITPLEQYEEEKKNAVNRIVIRETVPEGLQNQLFSAKSKT
TVPVYFYNESSNQFQPIGDIEKNSEQLTQLLKAIEPQHIRLL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggttgcccatttaaatattcatacttcatatgaacttttaaattcaagtataacaatt
aaaggggcaattgcgcgtgcgattgaattaggctactcagctattgcgattacagattta
aatgtcatgtatggtgtgcctcagttttatgacgagtgtactaaaaaaggcattaaaccg
ttgcttgggatgacggtatatatcacagatcaactgaacgttttagaagtggttctcatc
gctaaaaataacgaaggtttgaaaaatctttttcaattgtcaacagatattcaagtcaac
caacgggaacaagtatcgatttacgatattcaagcgtatctacaacataatgtcgttatt
tttaaaaatatgactgagcaaacattgcattggttagacgaaatacctatagaaagttca
tattatgtgaatcatcattccgttgtagaccatgcgatacctcgtgtttatttggaaagt
gctttttatttaaaacccgaagataaagatacattaaaagtcttaaatgccattcgtgat
aatacaaaagtgaattttgtagacaacgaagatggaccttcacgtcatatgtttaccata
aacgaactaagtgaagctgaaatcaatgcacaatatgtgaacgctacggatgaggtggca
gatttatgtgaggcaaaacttgaatatcatcaagcactgcttccagagtttcaaacacct
gatggtagctctgctgatcattatttatggcgggtattggaaaagtcgttacaaaatatg
gggttatcaaaaccggattatatggaacggttaaaatatgaatatcaagtcatcactaaa
atgggttatgccgattattttctcatagtgagtgacttaatccgttatgccaaatcaaat
ggtgtcatggtaggaccgggtcggggttcatcagcagggtctttggtcagttatttactc
aatattacgaccattgaccccttgaagtatgacttactttttgagcgctttctcaaccct
gagcgtgtcacaatgccagatattgatatcgactttgaagatacacagagagaaaaagtc
atccaatatgtacaaaacaaatatggtgattatcgtgtggcaggtattgtcacttttggt
catttacttgccaaagcagtggcaagagatgtggggcgagtgatgggatttgatgaaaca
acgttgagtgaagcttctaaacttattcctagtaaattaggtgtgacccttgatgaagct
tatgcacaagagaattttaaagcatttgtgcatcgaaatcatagaaatgaacgttggttc
gaattttgtaaaaaacttgaaggtttacctcggaacacatctacgcacgcagcgggtgta
attgtcaatgaccagccattatacgaatccattccgcttactgaaggtgacacaggactt
ttaacacagtggacgatgactgaggctgaaaaaatcggtttattaaaaattgatttctta
ggattacgtaatctcacaatcattcatcaaatcattaaacaaattaaacatgatatgaaa
atcgatttaaatattgaggagattccttttgatgacaaggaagtatttcgacttctttca
aaaggcgaaacgacaggtattttccaattagagtctgacggggttcgccgtgtattgcaa
aaactacagcctgagcattttgaagatatagtagctgtgacctctttatatcgacctggc
ccgatggaagaaattccaacatatattcgacgacgtcatgatccttcgcaagttcaatat
ttacatccagatttagaaccgattctaaaaaggacttacggcgtgattatatatcaagaa
cagattatgcaaattgcgagtcaatttgcaggtttttcatatggtgaagctgatatttta
agacgtgcaatgagcaaaaagaatagagaagtattggaaaatgaacgccagcattttatg
gatggtgcaatgaagaagggctatgctaatgcgttgagcagtcaaatttttgatttaata
ttgaaatttgctgattacggttttcctagagcccatgccgtgagctattcgaaaattgct
tatatcatgacttatttgaaagtgcactatccaacttatttttatgccaacatattgagt
aatgtcattggaaacgaagcaaagacacaattaatgattcaagaagctaaacaacagcag
attaaaattcatggcccgcatattaactggagtcaatggcgctatgtcgccacacaaaaa
ggtgtttatatctcattaggtgctatcaaaggaatcggatatcaaagtgtacaagctatt
gtgtcagagcgcatcgagcacgggccttttaaagacttttttgatttttgtgatcgtatc
cctaatcgaatacgaacgagacgcttacttgaagcacttattttaactggggctttagat
tgtttcgacaagaatagagcgacacttttacagtccattgacaaagtaaccgactctaac
agtgatattgatcaaagttttgtagatacgtttgcaacaattaaaagagattaccttgaa
acagaagaaatgccagaacaacagttaagtgactatgaaaagcaatatctcggcttttac
gtttcgatgcatccagtggagaaacaatttgtgaaaaagcaatatctcggcatttaccaa
ttgaatagcaaattaatcaatcaacctattttagtaacaatggatgcgattcgtgttatc
cgaacaaaacaagggcaacaaatggctttcgttgagttgaatgatggggaacacactgta
gatggtgtcatctttccaaaagtctttcaaagtttcgcggaacttattcaagaaaatgct
tattatattgtttggggtaaatttgaaaaaagaaatgaaaagatgcagatgataattcaa
aagataacgccgcttgaacaatatgaagaggaaaagaagaacgctgtaaatcgaattgtg
attagggaaacagtaccggaagggttacaaaatcaactgttttcagcaaaatcgaaaacg
acagtgccggtctatttctacaacgaatcatcgaatcaatttcagcctataggtgatatt
gaaaagaactctgagcaactgacgcagttattaaaagcgattgaaccacaacatattcgt
ttgttataa
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