Mammaliicoccus fleurettii: FOB90_04260
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Entry
FOB90_04260 CDS
T06358
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sff
Mammaliicoccus fleurettii
Pathway
sff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB90_04260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sff03021
]
FOB90_04260
03019 Messenger RNA biogenesis [BR:
sff03019
]
FOB90_04260
Transcription machinery [BR:
sff03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FOB90_04260
Messenger RNA biogenesis [BR:
sff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOB90_04260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Mor
AAA_24
Spore_III_AA
AAA
AAA_25
Rad9_Rad53_bind
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QGS45944
LinkDB
All DBs
Position
complement(847798..849111)
Genome browser
AA seq
437 aa
AA seq
DB search
MSRERTSPQYESFHELYKNNTTKALTEKAKSLKLVNYSKLNKKELVLAIMEVQMEQDGNY
YMEGILDDIQQDGYGFLRTVNFSKGEKDIYISASQIRRFEIKLGDKVTGKVRKPKENEKY
YGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIRLETEPQNYSTRVMDLITPIGLGQR
GLIVAPPKAGKTSLLKEIANAIVTNKPNAKLFILLIGERPEEVTDIERSVDEAEVVHSTF
DEHPKHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVVPPSGRTLSGGLDPA
SLHGPKTFFGAARNIEAGGSLTILATALIDTGSRMDDMIYEEFKGTGNMELHLDRKLSER
RIFPAIDISRSSTRKEELLLPKSELDSLWQLRNMFSSAPDFTERFIRKLKRTKTNEEFFE
VLQKSAAESTKTGKPII
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggaaagaacatctccacaatatgaatcttttcatgaattatataagaataat
acaacgaaagccctcacagaaaaggcgaaatctcttaaacttgttaactatagtaaatta
aacaaaaaagaacttgtacttgctataatggaagtccaaatggagcaagatggcaattat
tatatggagggaatccttgacgatatacagcaggatggctatggattcttaagaacagtc
aacttttcgaaaggcgaaaaggatatctatatatctgctagtcaaattaggcgcttcgaa
atcaagttaggcgataaagtaacaggaaaagttcgaaagccgaaagaaaatgaaaaatat
tatggattacttcaagtagacttcgttaatgaccacaatgcagaagaagtcaaaaaacgt
cctcacttccaagcacttacacctttatacccagatgaacgaattcgattagaaactgaa
cctcaaaattattcaacacgcgtgatggatttaatcacacctattggtttagggcaacgc
ggcttgattgttgcgccaccgaaagccgggaaaacctctttactcaaagaaatcgcaaac
gcgattgttactaataaacccaacgctaaattatttattttacttataggggaacgtcct
gaagaagtgacagatatagaacgctctgttgatgaagcagaagttgttcattctactttt
gatgaacacccaaaacatcacgtcaaagtagcagaacttttattagaacgtgctaaacgt
ctcgtagaaattggagaagacgttattatattaatggattctattacaagattagcgcgt
gcttataaccttgttgtgcctccgagtggcagaactttatctggtggtttagatcctgct
tccttacatggtccaaaaacgttttttggtgcagcgagaaatattgaagctgggggtagc
ttaacaattttagcgactgcattgattgatacaggctcacgtatggatgacatgatttac
gaagagttcaaaggaacaggtaatatggaattacatttagacagaaaactatctgagcgc
cgtatttttcctgcgattgatatttcaagaagctctacgcgaaaagaagaattactactt
cctaaaagcgaattagatagcttatggcaattgagaaatatgttctcaagtgcacctgac
tttacagagcgctttattcgaaaattgaagcggacgaaaacgaacgaagaattttttgaa
gtcctacaaaaaagcgcagccgaaagtacaaaaacaggtaagcctattatttaa
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