Serratia fonticola GS2: AV650_01045
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Entry
AV650_01045 CDS
T04716
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg00730
Thiamine metabolism
sfg01100
Metabolic pathways
sfg01240
Biosynthesis of cofactors
Module
sfg_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AV650_01045
Enzymes [BR:
sfg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AV650_01045
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ALX92240
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Position
220367..222310
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AA seq
647 aa
AA seq
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MSTVNQPRARKQQRDQAQDFIDSLQGVTFPNSQRIYLAGSRSDIQVPMREIQLSPTLIGG
NKDQPQYEQNEAIPVYDTAGPYGDPQALIDVHHGLAKVRADWIAERADTEALNGVSSGFT
QQRLADVGLDHLRFEHLPLPRKALPGKCVTQLHYARAGIVTPEMEFIAIRENMGRERIRG
EVLRHQHPGQSWGANLPENITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPQTARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVR
DYAAAQEAAKPIEVQLTGMEKMSAEFRSRGSELYHSAANLQEEINND
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgtgaaccaacctcgtgcccgtaaacagcagcgtgaccaagcgcaagatttt
atcgactctctgcaaggcgttaccttccctaactcacagcggatctatctcgcagggtcg
cgcagcgatattcaggtacccatgcgtgagatccagctcagcccgacgctgattggcggc
aacaaagaccagccccaatatgaacagaacgaagccattccggtgtatgacaccgcaggg
ccgtatggcgatccgcaagcgttgatcgacgtacatcatggcttggccaaggtacgagcg
gactggatcgccgaacgtgccgataccgaagcgttaaacggcgtcagttccggcttcacc
caacaacgactggcggatgttgggttagaccatctgcgctttgagcacctgccgctgccc
cgcaaagccctgccgggtaaatgcgttacgcagttgcattacgctcgcgccggtattgtc
accccagagatggaatttatcgccattcgcgaaaatatgggccgtgagcgcattcgtggt
gaagtgctgcgccaccagcatcccggccagagctggggcgctaatctaccggagaacatc
acgccggaatttgtgcgccaggaagtggctgctggccgcgccatcatccccgccaacatc
aaccacccggaatccgagccgatgattattggccgtaatttcctggtcaaggtgaatgcc
aatatcggcaactcggcggtcacctcttcgatcgaagaggaggtcgagaagctggtgtgg
tcaacccgctggggcgctgacaccgtgatggatctctccacgggccgttatatccacgaa
acccgtgaatggatcctgcgtaacagcccggtgccgattggtacggtgccgatctatcag
gcgctggaaaaagtgaacggcgtagcggagaacctgacctgggaaatgttccgcgatacc
ctgctggaacaggctgagcaaggcgtcgattacttcaccattcacgccggggtgttgctg
cgctatgtgccgatgaccgccaaacgcctgaccggcattgtctcccgtggcggctcgatc
atggcgaagtggtgcctgtcgcatcatcaggaaaacttcctctatcagcacttccgcgag
atctgcgaaatttgcgccgcttacgatgtctcgctgtcactcggcgacggcctgcgtcca
ggctcgatccaggatgccaatgacgaagcacaattcgctgaactgcataccctgggcgaa
ctgaccaagattgcctgggaatatgacgtacaggtgatgatcgaaggcccaggccacgtg
ccgatgcagatgatccgccgcaacatgaccgaggagctggaacattgccatgaagcaccg
ttctacacgctggggccattgaccaccgatatcgcaccgggttacgaccatttcacctcc
gggatcggcgcggcaatgatcggctggttcggctgtgcgatgctttgctacgtgacgccg
aaggaacatctggggctgcctaacaaagaagacgtgaaacaggggctgatcacttacaag
atcgccgctcacgccgccgacttggcaaaaggccatccgggcgcacagatccgcgataac
gccatgtccaaggcgcgctttgagttccgttgggaagatcagttcaacctggcgctggat
ccacaaaccgcccgcgcctatcacgacgaaacgctgccgcaagaatccggcaagatcgcc
cacttctgctccatgtgtgggccgaagttctgctccatgaaaatctcccaggaagtgcgt
gactatgctgccgcacaggaagccgccaagccgatcgaagtgcaactgaccgggatggag
aaaatgtcggctgaattccgctcacgcggcagcgagctctaccacagcgcggccaatttg
caggaggagataaataatgactaa
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