| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
sfg Serratia fonticola GS2
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sfg00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AV650_01090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sfg03021]
AV650_01090
03400 DNA repair and recombination proteins [BR:sfg03400]
AV650_01090
Enzymes [BR:sfg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AV650_01090
Transcription machinery [BR:sfg03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AV650_01090
DNA repair and recombination proteins [BR:sfg03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AV650_01090
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(228201..232424)
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| AA seq |
1407 aa
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLERRQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKNMDLEAECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERVYRAG
LASLHARVKVRITEEIKNTEGESVHQTSIIDTTIGRAILWMIVPQGLPYSIVNQPLGKKA
ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPAKKAEIIEEAETE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSVEDVVNRDGVVEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHNGIMMTPVIEGGDVKEPLRERVL
GRVTAEDVIKPGTADILVPRNTLLNEKTCDLLEENSVDSVKVRSVVSCETDFGVCANCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGNLKL
SNVKFVMNASGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMGKGDGAEVNGGETVANW
DPHTMPVVTEVSGFIRFADMVDGQTITRQTDELTGLSSLVVLDSAERTGSGKDLRPALKI
VDAKGDDVLIPGTDMPAQYFLPGKAIVQLEDGIQIGAGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVISPLDGSDAYEEMIPKWRQLNVFE
GEIVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKGTIVSAGSTEFLEGEQAEVSRVKIANRKLAAEGKIEATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRKALGETPV
VPLVSAEEATANLAELLNAGNLGGSDE |
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| NT seq |
4224 nt +upstreamnt +downstreamnt
gtgaaagacttattaaagtttctgaaagcgcaaactaagaccgaagagtttgatgcgatc
aagattgctctggcatcgccagacatgatccgttcatggtcgttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaacctgagcgtgacggccttttctgcgcccgt
atctttgggccggtaaaagattacgagtgcctgtgcggtaagtacaagcgcttgaaacac
cgcggcgtgatctgtgagaagtgcggcgttgaagtgacccagaccaaagtacgccgtgag
cgtatgggccacatcgaactggcttccccaactgcgcacatctggttcctgaaatcgctg
ccttcgcgcatcggtttgctgctggatatgccgctgcgtgacatcgaacgtgtactgtac
ttcgaatcctacgtggtagtcgaaggcggtatgaccaacctcgagcgtcgtcagatcctg
actgaagagcagtatctggatgcgctggaagagtttggtgacgaattcgacgccaagatg
ggtgcggaagctattcaggccctgttgaaaaacatggatctggaagccgagtgtgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaagaagctgaccaagcgt
atcaagctgctggaagcgttcgtgcaatctggtaacaagccagagtggatgatcctgacc
gtgctgccggtactgccgccagatctgcgtccattggttccactggatggtggccgtttc
gcgacttcagatctgaacgatctgtaccgccgcgtgatcaaccgtaacaaccgtctgaaa
cgcctgctggatctggctgcgcctgacatcatcgtgcgcaacgaaaagcgtatgctgcaa
gaagcggtagatgccctgctggataacggccgtcgcggtcgtgctatcaccggttccaac
aagcgtcctctgaaatctttggccgacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgttgggtaaacgtgttgactactctggtcgttctgtcatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctggccacaacgatcaaagccgccaagaaaatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagtgatccgcgaacacccg
gtactgctgaaccgtgcaccaaccctgcaccgtttgggtatccaggcgtttgaaccggtt
ctgatcgaaggtaaagcgatccagctgcacccgctggtttgtgctgcctacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgttgacgctggaagcccagctggaagcg
cgtgcgttgatgatgtctaccaacaacatcctgtcaccagcgaacggcgagccaatcatc
gttccttctcaggacgttgtattgggtctgtactatatgactcgtgactgtgttaacgcc
aaaggcgaaggcatggttctgacgggtcctaaagaagctgaacgcgtttaccgcgccggt
ctggcctctctgcatgcacgcgtaaaagtgcgtattacagaagagatcaagaataccgaa
ggtgaatctgttcaccagacttcgattattgataccaccatcggtcgcgccatcctgtgg
atgatcgtaccgcaaggtctgccttactcgatcgttaaccagcctctgggcaagaaagcg
atctccaagatgctgaacacctgttaccgcatcctgggcctgaagccgaccgtaatcttc
gctgaccagatcatgtacaccggttttgcttacgctgcccgttcaggcgcatccgtaggt
atcgatgacatggttatcccagccaagaaagcagagatcatcgaagaagcggaaaccgaa
gttgccgagatccaggagcagttccagtctggtctggttaccgcgggcgaacgctacaac
aaagtgatcgatatctgggctgcggcgaacgaacgtgttgctaaagcgatgatggaaaac
ctgtcggttgaagacgtggttaaccgtgacggcgtggtggaacaacaagtttccttcaac
agcatctttatgatggccgactccggtgctcgtggttctgccgctcagatccgtcagttg
gcgggtatgcgtggcctgatggccaagccagatggctccatcatcgaaacgccaatcaca
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgctcgt
aaaggcttggcggataccgcactgaaaacggcaaactccggttatctgacccgtcgtctg
gttgacgtggcgcaggacctggtagtgaccgaagacgactgtggtactcacaacggcatc
atgatgactccggttatcgaaggtggtgacgttaaagagccactgcgtgaacgcgttctg
ggtcgtgtgaccgctgaagatgtcatcaagccgggtacggctgacatcctggtgccacgt
aacaccctgctgaacgagaagacctgtgacctgttggaagagaactctgtcgacagcgtt
aaagtccgttccgtagttagctgtgaaaccgactttggcgtgtgcgccaactgctatggt
cgcgacctggcacgtggccacatcatcaacaaaggtgaagctatcggcgttatcgcggcc
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggcagcagaatccagcatccaggtgaagaacaaaggtaacctgaagctg
agcaacgtgaagttcgttatgaacgcctcaggcaagctggtcattacctcgcgtaatacc
gaactgaagctgatcgacgaattcggccgtaccaaagaaagctacaaagtgccttacggt
gccgtaatgggcaaaggtgatggtgcagaagttaacggcggcgaaaccgttgctaactgg
gatccacacaccatgccggttgtgaccgaggtgagcggtttcattcgcttcgccgatatg
gttgacggccagaccattacccgccagaccgacgaactgaccggtttgtcttctctggtg
gtactggacagcgcagaacgtaccggtagcggtaaagacctgcgtccggcactgaaaatc
gttgatgccaaaggcgacgacgtattgatcccaggtactgatatgcctgctcaatacttc
ctgccgggtaaagcgattgtgcagctggaagacggcattcagatcggtgcgggtgatacc
ctggcgcgtattcctcaggaatccggcggtaccaaggatattaccggtggtctgccacgc
gttgcggatctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagc
gggattatctcgttcggtaaagagaccaaaggcaaacgtcgcctggtaatctctccactg
gacggcagcgacgcttacgaagagatgatccctaaatggcgtcagctcaacgtgttcgaa
ggtgaaattgtggaacgtggtgacgttgtttctgacggcccagaatctccacatgacatt
ctgcgtctgcgtggtgtgcatgcggttacccgctacatcaccaacgaagtgcaggaagtt
taccgtctgcaaggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ctgcgtaaagggaccatcgttagcgctggtagcaccgagttcctggaaggcgaacaggct
gaagtatcacgcgttaagattgctaaccgtaaacttgctgctgaaggcaagatcgaagca
accttctcacgcgatctgctgggtatcaccaaggcttccttggcgaccgagtccttcatc
tctgctgcatcgttccaggaaacgacgcgcgttctcaccgaagcggctgttgccggtaag
cgtgatgaactgcgcggcctgaaagagaacgtgatcgtgggccgtctgatcccagccggt
accggttacgcttatcaccaggatcgtatgcgccgtaaggctctgggtgaaactccggtt
gttccgctggttagcgcggaagaagcgacagccaacctggccgaattgctcaacgctggc
aacctgggtggcagtgacgaataa |
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