Serratia fonticola GS2: AV650_01220
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Entry
AV650_01220 CDS
T04716
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg00071
Fatty acid degradation
sfg00280
Valine, leucine and isoleucine degradation
sfg00310
Lysine degradation
sfg00362
Benzoate degradation
sfg00380
Tryptophan metabolism
sfg00410
beta-Alanine metabolism
sfg00640
Propanoate metabolism
sfg00650
Butanoate metabolism
sfg00907
Pinene, camphor and geraniol degradation
sfg00930
Caprolactam degradation
sfg01100
Metabolic pathways
sfg01110
Biosynthesis of secondary metabolites
sfg01120
Microbial metabolism in diverse environments
sfg01200
Carbon metabolism
sfg01212
Fatty acid metabolism
Module
sfg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AV650_01220 (fadB)
00650 Butanoate metabolism
AV650_01220 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AV650_01220 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AV650_01220 (fadB)
00310 Lysine degradation
AV650_01220 (fadB)
00380 Tryptophan metabolism
AV650_01220 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AV650_01220 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AV650_01220 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AV650_01220 (fadB)
00930 Caprolactam degradation
AV650_01220 (fadB)
Enzymes [BR:
sfg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AV650_01220 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AV650_01220 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AV650_01220 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AV650_01220 (fadB)
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ALX92266
LinkDB
All DBs
Position
257391..259583
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQGETLQVHWLDNGIAELVFNAPGPINKLDTSTVASLGAALEVLEQQTELKGLLLRSA
KSAFIVGADITEFLSLFAAPAEKLHEWLVFANTIFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRIASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDIGAKDALK
VGLVDAVVAPEKLVEAALKVLQQAIDGQLDWRAYRQPKLEPLKLSPIEAAMSFTTAKGMV
MQTAGKHYPAPMTAVKTIEAAAKFGREEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKNVEAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLTLGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQLIVEAVVENPKVKAAVLSEVEALIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSDSTIAAVVAY
ATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMANGFPERMSKNYRDAIDVMFDNQRFGQKNQLGFYRYSQDSKGKP
RKDNDEQTDTLLATVSASAQTFSSEEIIARMMIPMINEVVRCLEEGIVASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVEMAQRYANLGALYQVPAGLRAKAERNESYYPVVTAA
LSDISTGQPA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaagtacactggctcgacaacggcatcgccgagttg
gtgttcaacgcaccaggcccgatcaacaagctggataccagcaccgttgccagcctgggt
gccgcactcgaggtgctggaacagcaaaccgagttgaaagggctgctgctgcgctctgcc
aaatccgcattcatcgtgggtgccgacatcaccgagtttctctcgctgtttgccgcaccg
gctgaaaagctgcatgaatggctggtgtttgccaataccatctttaaccggctggaagat
ttgccggtgccaaccatttccgccattaacggttacgcgttaggcggtggctgcgaatgc
atcctggcgaccgatttccgtatcgcctctccagacgcacgcatcggtctgccggaaacc
aaactgggcatcatgccaggattcgggggttccgtacgtctgccacgcctgctgggtaac
gacagcgcgctggaaatcattgccgccgggaaagatatcggcgcgaaagacgcgctgaaa
gtcggcctggtcgatgccgtggtcgcaccggagaaactggtggaagccgcgctgaaagta
ctgcaacaggcgatcgacggccaactcgactggcgcgcctaccgtcagccgaagctggag
ccgctgaaactgagcccaatcgaagcggccatgagtttcaccacggccaaaggcatggtg
atgcaaactgccgggaaacattatcctgcgccaatgaccgcggtaaaaactatcgaagcc
gccgccaagtttggccgtgaagaagcgttgaaactggaaaccgccagctttgtgcctttg
gcccgctctaacgaagcgcgcgccctggtgggcattttcctcaacgatcagttcgtgaaa
ggccaggcgaaaaaattggccaagaacgttgaagcaccgaaacaggctgccgtgctgggt
gccgggattatggggggcggcatcgcctaccaatccgcgctgaaaggcgtaccggtgatc
atgaaggacatcagcgacaaatccctgactctcggcatgaatgaagcggccaaactgctg
aataaacagctggagcgcggcaaactggatggcttgaagatggcacaggtgctgtcaacc
atccagccaacgctggactatgccggaatcgaacgcgcccaactgattgttgaggccgta
gttgaaaatcctaaggtaaaagcggcggtgttgtctgaagtggaagccctgatcggcgaa
gataccgtactggcctccaatacctcaaccatcccgatcaatcacctggcaaaatcgttg
aagcgcccgcaaaacttctgcggtatgcatttcttcaacccggtgcaccgcatgccgttg
gttgagataatccgcggtgaacacaccagcgacagcactatcgccgccgtggtggcctac
gccacccgcatgggcaaaacgccgatcgtggtcaatgattgccctgggttcttcgttaac
cgcgtgctgttcccgtattttgccgggttcagtcagctgctgcgcgacggcgccgacttc
cgtcagatcgacaaagtgatggaaaaacagttcggctggccgatgggcccggcgtatctg
ttggatgtggtcggtattgataccgcgcaccatgcccaggcggtgatggccaacggtttc
cctgagcgcatgagtaaaaattaccgcgatgcgatcgacgtgatgttcgataaccaacgc
ttcggccagaaaaaccagctgggcttctaccgctacagccaggatagcaaaggcaagccg
cgtaaagataacgacgagcaaaccgacactctgctggcaaccgtgagcgcatcggcacag
accttcagcagtgaagagatcattgcccgcatgatgatcccgatgatcaacgaagtggta
cgctgtctggaagaaggcattgtggccagcccggcagaagcggatatggcattggtttac
ggcatcggcttcccgccgttccacggtggcgcattccgctatctggatacgctcggcacc
gccaattacgtcgaaatggcccagcgttacgctaacctgggggcgctgtatcaagtgcca
gccggcctgcgtgccaaggcggaacgtaatgaaagctactacccggtggtgacagcggcg
ctgtctgatatctccactggccaaccggcatga
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