Serratia fonticola GS2: AV650_01635
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Entry
AV650_01635 CDS
T04716
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg03420
Nucleotide excision repair
sfg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AV650_01635 (uvrD)
03430 Mismatch repair
AV650_01635 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_01635 (uvrD)
Enzymes [BR:
sfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AV650_01635 (uvrD)
DNA repair and recombination proteins [BR:
sfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV650_01635 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AV650_01635 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
ALX97120
UniProt:
A0A0U4IG47
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All DBs
Position
complement(347754..349916)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSMNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRIVRALNIDEKQWPPRQAMWYINGKKDDGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNRIQYAWIHMLAGGK
ANVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETVRLEQNYRSTSTILKAANTLIANN
DGRMGKNLWTEGAEGEPISIYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRALLQDKVLAGRAASSLQRFLELVDSLAHETAEMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFRQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGLTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEIPEDCVEEVRLRASVSRSVSHRRMG
TPISENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQIAFQGEGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccgacctgctcgacagcatgaatgataaacaacgtgaagccgtggctgcg
ccacgcagcaacctgttggtgctggccggtgcaggcagcggcaagacccgggtgctggtg
catcgcattgcctggctactggcggtggagaactgctcaccgtactccatcatggcggtg
accttcaccaacaaggcggcggcagagatgcgccaccgtatcgaacacctgattggtacc
agccagggcggcatgtggatcggcaccttccacggcttggcacaccgcctgctgcgcgct
catcatatggacgccaacctgccgcaggacttccagatcctggatagtgaagaccagctg
cgcctcctgaaacgtatagtgcgggcgctgaacattgacgagaagcaatggccgccgcgc
caggcgatgtggtacatcaacggcaagaaagacgatggcctacgtccacagcatatcgaa
agctacggcaacccggtggaagccacctggttgcggatctatcaggcttatcaagaggct
tgcgatcgtgcagggctggtcgattttgccgaattgctgctgcgcgctcatgagctgtgg
ctgaacaagccacatatcctcaatcattatcgtgagcgcttcaccaatatcctggtggac
gaattccaggacaccaaccgcatccagtacgcctggatccacatgctggccgggggtaag
gccaacgtaatgatcgtgggggatgatgaccagtcgatctacggctggcgtggtgcgcag
gtggaaaacatccagcgtttcctgaaggatttccccggtgcagaaacggtgcgtctggag
cagaactaccgttcgaccagcaccatcctgaaggctgccaacaccctgatcgccaataac
gacgggcgcatgggcaaaaacctgtggaccgaaggggccgaaggcgagccgatctcgatt
tactgtgcgttcaacgagctggatgaagcccgctttgtggttaaccgcatcaaggcctgg
caggacaacggcggcgcgctgaacgactgtgccatcctgtatcgcagcaacgcccaatcg
cgcgtgctggaagaggccttgttgcaaactgccatgccataccgcatatacggcggcatg
cgcttcttcgaacgtcaggagatcaaggatgccctggcctatctgcggctgatcgccaac
cgtaacgacgatgcggcctttgagcgcgttgtgaataccccaacgcgcggcattggcgat
cgtaccctcgacgtagtgcgccaggcggcacgtgaccgccagctgacgctgtggcaggct
acgcgtgcgctgctgcaagataaggtgctggcgggccgtgcagcgtcctccctgcagcgt
tttctggagctggtggactcactggcccacgaaaccgccgaaatgccactgcatgtgcaa
actgaccgggtgatccgcgattccggactgttcatcatgtatgagcaggaaaagggcgag
aagggccaggcgcgtatcgaaaaccttgaggaactggtcacggccacgcgccaatacagc
taccaggatgaagatcaggatctgatgccgttgcaggccttcctgtcccatgccgcgctg
gaagcgggggaagggcaggcagatgcctatcaggacgcggtgcaactgatgaccctgcac
tcggctaaagggttggagttccgccaggtgtttatcgtcggcatggaagaggggatgttc
ccaagccagatgtcgctggacgaaggtggccgcctggaagaggagcgccgcctggcctat
gttggcctgacccgtgcaatgcaaaagctgacgctgacctatgcggaaacccgccgcctg
tatggtaaagaggtgtatcaccggccatcacgctttatcggtgagatcccggaagactgt
gtggaagaggtgcgcctgcgggccagcgtctcccgctcggtaagccaccgcaggatgggg
acgccgatcagtgaaaacgacactggttacaagcttggacagcgcgtgcgccatgccaaa
tttggtgagggcaccatcgtcaacctggaaggcagcggtgaacacagccggttgcagatc
gcgtttcagggtgaaggcatcaagtggctggtagcagcctacgccaagctggaaacggtg
taa
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