Serratia fonticola GS2: AV650_03195
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Entry
AV650_03195 CDS
T04716
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg03030
DNA replication
sfg03410
Base excision repair
sfg03420
Nucleotide excision repair
sfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV650_03195
03410 Base excision repair
AV650_03195
03420 Nucleotide excision repair
AV650_03195
03440 Homologous recombination
AV650_03195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfg03032
]
AV650_03195
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_03195
Enzymes [BR:
sfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV650_03195
DNA replication proteins [BR:
sfg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AV650_03195
DNA repair and recombination proteins [BR:
sfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AV650_03195
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV650_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALX92624
LinkDB
All DBs
Position
702642..705437
Genome browser
AA seq
931 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSVGEPTGAMYGVLNMLRSLLLQYTPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDQLYANLDSIATLSFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELDLKCSELEVSPPDVDQLQALFKRYEFKRWMADVEAGTWLENK
GSGRKASAAAKPASTAEAPRAAVEPTLSQEGYVTILDEETFADWMQRLKQAEVFAFDTET
DGLDTLTANLIGLSFAIEPGVAAYLPVAHDYLDAPPQLDRNHVLATLKPLLEDEKALKVG
QNLKFDKSLLARYDIDLRGIAYDTMLESYVLDSVSGRHDMDSLADRYLGHKTITFEEIAG
KGKKQLTFNQIALEEAGPYAAEDADVTLQLHLAMWPQLKESEGLLTVFNEIEMPLLPVLS
HIERTGVLIDPNILAAHSIELTKRLGELEVQAHELAEEPFNLASTKQLQAILYEKQKLPV
LKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVHTS
YHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPEGYRIVAADYSQIELRIMAHLS
QDEGLLTAFAEGKDIHRATAAEVFGLALEKVTNEQRRSAKAINFGLIYGMSAFGLARQLG
IPRGEAQRYMDLYFERYPGVLEYMERTRQQAAEQGYVSTLDGRRLYLPDVRSSNGMRRKA
AERAAINAPMQGTAADIIKRAMIEVDAWLQGPEKPLVRMIMQVHDELVFEIHESAIEEAS
LRIHELMENSMQLAVPLRVDIGVGKNWDEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattaatcctggtggatggttcctcttacctttaccgc
gcctaccacgccttcccaccgctgacaaactcggtcggtgagccgacgggagcgatgtac
ggtgtgctgaacatgctgcgcagcctgctgttgcagtatacccccagccatgtggcggtg
gtgtttgatgccaaagggaagaccttccgtgacgagctgtttgccgaatataaatcacat
cggccaccgatgccggacgatttgcgagcgcagatcgaaccgctgcaccagatggttaaa
gccatggggttaccgttgctggttacacctggcgtagaggccgatgacgtaatcggcact
ctggcgctagaggctgagaaagcgggtcatgccgtgttgatcagcaccggcgacaaagat
atggctcagttggtgacgccgaatgttaccctgatcaataccatgaacaacaccatcctc
ggcccgcaggaggtctgtgataaatacggtattcctcctgaactgatcatcgatttcctg
gcgctgatgggggattcgtcagataacatccctggcgtacctggggtgggtgagaaaacg
gcccaggcgctgctgcaagggttagggggcctggatcagctctatgccaatctggatagc
attgccacgctgagcttccgcggtgccaagaccatggcggccaagctggagcagaacaaa
gaggtggcctatctctcttacaaactggcgacaatcaaaaccgatgttgaactggatctg
aaatgcagtgagctggaagtgagcccaccggatgtcgatcaactgcaggcgctgtttaag
cgctacgagttcaaacgctggatggccgatgttgaagccgggacctggttagaaaacaaa
gggtcaggtcgtaaggccagcgcggcagccaagccagcctcaacggcagaagcaccaaga
gccgccgtagagcctaccctgtcgcaggaaggttacgtcaccattctggatgaggaaacc
ttcgccgattggatgcagcgcctgaaacaggccgaagttttcgccttcgataccgaaact
gacggcctggataccctgacggctaacctgatcggtctgtccttcgccattgagcctggc
gtggcggcgtacctgccggttgcacacgattatctggatgctcccccacagctggatcgt
aaccacgtgctggccaccctgaagccgctgctggaagacgaaaaggcgttgaaggtgggg
cagaacctgaagttcgataaaagcctgctggcccgctatgacatcgatctacgcggtatc
gcctacgacaccatgctggagtcctacgtactcgacagcgtcagtggccgtcacgatatg
gatagcctggccgatcgctacctgggccataaaaccattaccttcgaagagatcgcgggc
aaaggcaaaaaacagttaacctttaaccagatcgcccttgaagaggcgggcccttatgcg
gcagaagatgccgacgttacgctacagctgcatttggcgatgtggccgcagttgaaagag
agtgaaggcctgctgacggtattcaatgagattgaaatgccgctgttgccggtgctttcc
catatcgaacgcaccggggtgctgatcgatcctaacattctggctgctcactccattgag
ttgaccaagcgcctcggcgagcttgaagtgcaggcccatgaattggcagaagagccgttc
aatctggcctcgaccaagcagttgcaggccattttgtatgaaaagcaaaagctgccggtg
ctgaaaaagacccctggcggtgctccttcaaccaatgaggaagtgctggccgagttggcg
ctggattatccgctgccgaaagtgatcctggaataccgtggtctggcgaagctgaaaacc
acctataccgacaaactgccgttgatgatcaacccggttagcgggcgggtgcatacttcc
tatcaccaagccgtcaccgccaccggtcgcctgtcatccagcgatccaaacctgcaaaac
attccggtacgtaacgatgaagggcgccgtatccgtcaggcatttattgcgcctgagggt
taccgtattgtcgcggcggactactcgcagattgaactgcgcatcatggcccatttatcg
caggacgaaggcttgctcacagcgtttgctgaaggtaaggacatacaccgggcaacggcg
gcagaagtctttggtctggcgttggagaaggtcaccaacgaacagcgtcgcagtgccaag
gcgattaactttggtctgatttacggcatgagcgcatttggtttggctcgccagttgggg
atcccgcgcggcgaagcgcagcgctatatggatctgtacttcgagcgctaccctggcgtg
ctggagtatatggagcgcacccgtcagcaggctgccgagcagggctacgtcagcacgctg
gatggccgccggttgtatctgccggacgttcgctccagtaacggtatgcgtcgcaaggcg
gccgagagagcggcgattaacgcccctatgcagggcactgctgcggatatcatcaaacgt
gcgatgattgaggtggatgcctggctgcaagggcctgagaagccgctggtgcgcatgatc
atgcaggtacacgatgaactggtgtttgaaatccacgagtccgccatcgaagaggccagc
ctgcgcattcatgagttaatggaaaacagtatgcagctggctgttccgctgcgggtggac
atcggcgtaggtaaaaactgggatgaggctcactga
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