Serratia fonticola GS2: AV650_03950
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Entry
AV650_03950 CDS
T04716
Name
(GenBank) transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sfg
Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfg03000
]
AV650_03950
Transcription factors [BR:
sfg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AV650_03950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
HTH_Tnp_ISL3
MarR_2
AIRS
HTH_3
MerR
Motif
Other DBs
NCBI-ProteinID:
ALX92763
LinkDB
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Position
complement(857986..859014)
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AA seq
342 aa
AA seq
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MEHKQELPMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALTR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHKQIACIAGPEQMPLSHYRLQGYIQALRRNGITVESSYITRGDFTYEAGAQALASLM
ALPKPPTAVFCHSDVMAIGVLSQAKKLGLRVPQDLSIVGFDDIKLAQYCDPPLTTVAQPR
FQIGQQAMLLLLEQLHGQTVNSGSRLLDSELIVRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagcaagaattacccatggcgaccatgaaagacgttgccgaaatggccggc
gtttccacggcaaccgtgtcgcgtgcgctgatgaatccggaaaaggtgtcaacgccaacg
cgccagaaagtggaacaggccgtgctggccgtgggttactcccctcatgccctgacacgc
aatatcaaacgcaatgaatcccgcactatcctggtgatcgtcccggacatctgcgatccg
ttttttgccgacgtgatccaggggatcgaacaaacggcagcgcagcagggttacctggtg
ctgatcggcgactgtgcgcagcagaaccaacaggaacgcaccttcgttaacctgatcatc
accaaacaaatcgatggcatgctgctgctcggctccaacctgcctttcgacgccagcaag
gaagagcaacgcaacctgccgccaatggtaatggccaacgagtttgcaccggagctggaa
ctgccaacggtgcatatcgacaacctgaccgccgcgtttgaagccgtacattatctgcat
cagcttggccataaacagatcgcctgtatcgccgggccagaacagatgccgctgagccat
tatcggttgcaaggctacattcaggcgctacgccgtaatggcattaccgtcgaaagcagc
tatattacccggggtgacttcacctacgaagccggtgcgcaggcgttagcctcactgatg
gcactgccgaaaccgccaacggcggtcttttgtcacagcgacgtcatggcgatcggcgta
ttgtcccaggcgaaaaagctgggcttgcgtgtaccgcaggatctgtcgattgtcggcttt
gacgatatcaagctggcgcagtattgcgatccgccactgaccaccgtggcacagccccgc
ttccagattggtcagcaggcgatgttgctgctgctggaacagttgcatgggcaaaccgtg
aacagcggttcccggttactggacagtgaattgatcgtcagaggcagcaccgcggcccct
aaacgctag
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