Serratia fonticola GS2: AV650_03955
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Entry
AV650_03955 CDS
T04716
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AV650_03955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_03955
Enzymes [BR:
sfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AV650_03955
DNA repair and recombination proteins [BR:
sfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AV650_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ALX92764
UniProt:
A0AAP2FI38
LinkDB
All DBs
Position
complement(859295..861490)
Genome browser
AA seq
731 aa
AA seq
DB search
MPVVHVALPVPLARTFDYLLPAGLQPVIGARVSVPWGKQRAIGIITGSSESSELPLEKLK
PIDGLLDNDSLFTTSLWRILLWASEYYHYPIGEVLFHALPILLRQGKPAEAAPLWQWFAT
EQGRATPPESLKRAPKQQQALAALLQRPVYRHQVSELELTESALQALRAKGLIDLRSQTV
ATQDWRPGFAVLGERLRLNTEQATAVGAIRSEDEQFAAWLLAGVTGSGKTEVYLSVLENI
LAKGKQALVLVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLAVWLRARSGEAAIVI
GTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAHAENIPLVMGSATPAL
ETLHNVQLGKYRQLKLTQRAGNAKPANQHLIDLKGLPLKVGLSQPLLKSMQHHLKNGNQV
ILFLNRRGYAPALLCHECGWIAECQRCDHYYTFHQHQRQLRCHHCDSQRPVPHQCPQCGT
TNLVSVGVGTEQLENELAPLFPETAITRIDRDTTSRKGSLEQHLADIHRGGPRILIGTQM
LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVLLQTHHP
EHPLLQILLQQGYDAFAKQTLAERSSVFLPPYTSHIIVRSEDHDNQQAPLFLQQLRNLLE
ASPLKDDSLWVMGPVPALQPKRGGRFRWQLLLQHPSRKLLQHLIKSTLPLIGTLPQARKV
KWTLDVDPIDS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgtacacgttgctctaccggttccccttgcccgcaccttcgattatctgctg
cccgcaggcctgcagccggtcatcggcgcgcgcgtcagtgtgccttggggaaagcaacgg
gcgataggcatcatcaccggcagcagcgagagcagtgaactgccgctggaaaagctcaag
cccatcgatggcctgctggataacgactcgctgttcaccaccagcttgtggcgcatcctg
ctgtgggccagcgaatactaccattacccgatcggtgaagtgttgttccatgcgctgccc
attctgctgcgtcagggtaagcccgcagaagccgccccgctgtggcaatggtttgctacc
gagcaggggcgcgcaaccccgccggaaagcctgaagcgtgcgccaaagcagcaacaggca
ctggcggcactgctgcaacgcccggtgtatcgccatcaggtcagcgaattggagctgacg
gaaagcgcgctccaggcgctgcgggccaaaggcttgatcgacctgcgttcgcaaacggta
gcaacgcaggattggcggccaggctttgccgtgctcggcgaacgattgcggctcaatacc
gagcaggccaccgccgtgggcgctatccgcagtgaagacgagcagtttgccgcctggctg
ctggccggggtcaccggctccggcaaaaccgaggtttacctcagcgtgctggaaaatatc
ctggcgaaaggtaagcaggcgctggtgttggtgccggagatcggcctcaccccgcagacc
atcgctcgctttcgtgaacgcttcaacgcaccggtagaagtcctgcactccggcctgaac
gacagcgaacggctggccgtttggctacgcgcgcgcagcggtgaagccgccattgtgatc
ggcacccgctcggcgttgttcacccccttctcacgccttggggtgatcatcatcgacgaa
gaacacgacagctcctataaacagcaggaaggctggcgctatcacgctcgcgatctggcg
gtattccgcgctcacgccgaaaacatcccgctagtgatgggctctgcaacaccagcgctg
gaaacgctgcacaacgtgcagttaggcaaataccgccagctcaaactgacccagcgggcg
ggcaacgccaaaccggccaatcagcatctgatcgatttgaaaggcctgccgctgaaggtc
gggctctctcagcctctgctgaaaagcatgcagcaccacctgaagaacggcaatcaggtg
atcctgttccttaaccgccgtggctatgcccccgcgctgctgtgccatgagtgcggttgg
atcgccgaatgccagcgctgcgaccattactacacgttccaccagcatcaacgccagctg
cgctgccaccactgcgacagccagcgcccggtgccacatcagtgcccgcagtgcggtacc
accaacctggtttccgtcggcgtcggtactgaacagttggagaacgaactggctcccctg
ttcccggaaaccgccattacccgtatcgatcgcgataccaccagccgcaagggatcgctg
gaacagcatctggccgatattcaccgtggcggcccgcgtatcctgatcggcacgcaaatg
ctggccaaaggccaccacttcccagatgtcaccttggtagcgttgcttgacgtggacggc
gcgctattctccgccgatttccgttctgccgagcggtttgcccagctttatactcaggtt
tcaggccgtgccgggcgggcgggcaagcagggtgaagtgctgctgcaaacccatcaccca
gagcacccattactgcaaatcctgttgcaacagggttacgacgcctttgccaagcaaacc
ctggccgagcgtagcagcgtcttcctgccgccctacaccagccacatcatcgtgcgttcg
gaagatcacgataatcagcaggcaccgctgttcttacagcagctacgcaatctgttggaa
gccagcccgctgaaggatgattcgctgtgggtaatgggcccggttccggcactgcagccc
aaacgcgggggtcgcttccgctggcaactgttgttgcagcacccgtccagaaaactgtta
cagcacctgataaaaagcacgttgccattgattggcaccctgcctcaggcacgtaaagtc
aaatggacgttagacgttgatcccattgatagttga
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