Serratia fonticola GS2: AV650_04240
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Entry
AV650_04240 CDS
T04716
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV650_04240
Enzymes [BR:
sfg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AV650_04240
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_3
RIP
PAS_10
Motif
Other DBs
NCBI-ProteinID:
ALX92812
LinkDB
All DBs
Position
complement(925709..927700)
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AA seq
663 aa
AA seq
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MFADQGPILLNTHFGTSSPYWHLAFDSNALQLTAIKGKTHLAVALDEMQAAKIRRLSGVT
ASLDLTIQLSGQPIHLHLVGRRINKFEWAGTASAYTDTEAVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRVQRFNRLSEEYTGLQEQDVIGKNVFKMFMSPEEAAASRRNIANFFHNGA
SYEVERWIKTVKGERLFLFRNKFVHSGSGKKEVFLICSGTDITEERRAQERLRLLANTDT
ITGLPNRNAIQDDINRAISERGESHVGLVYLDLDNFKKVNDAYGHMFGDRLLIEVSHAIL
SCLDHGEKLARLGGDEFLVLVTQADRIMLQELAQRIIDRLQMPFRIGLIEVYTGCSIGIA
LCPQHGQDLDSLIRSADTAMYVAKEHGKRTFIVFSPDMNRRVAEYMWLDTNLRKGLEQEQ
LVVYYQPKVTTLNGAVNSVEALVRWDSPERGLIPPLQFISYAEESGLIAPLGRWVLQTAA
KQAAIWQQQGLNLRIAVNLSARQLVDDSVVDDLVEVLRENQLSPCTLDFELTESSLIEDE
NRAREVIARLRALGAQVHLDDFGTGYSSLAQLARIPLDAIKLDQSFVRGVNLAPVSQSLI
RAIVAVAEALQFKVIAEGVETDSENRFLDCVGVDEKQGFLFARPMLPEQLEQWLKTYSPQ
SPE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagaccaaggcccgatactccttaacacccattttggcaccagcagcccttac
tggcatctggcgtttgacagcaatgccctgcagttgacggcaatcaaaggcaaaacacac
cttgccgtggccctcgacgaaatgcaggcggcgaaaatccgccgtctgagcggggtcacc
gccagcctggatctgaccatccagctcagcggccagcccatccacctgcatttggtcggc
cgccggatcaataaatttgagtgggctggcaccgcctctgcctataccgataccgaggcc
gtggcacgtgatttggtgcacggcctatcgtttgccgaacaggtggtgtcagaggctaat
tccgtcattgtcatcgttgaccaacacggccgcgtccagcgctttaaccgcctgagcgaa
gagtataccggcctgcaggaacaggacgtgattggcaaaaacgtcttcaagatgtttatg
agccccgaagaggccgcagcatcccggcgcaatattgccaacttctttcacaacggggcc
tcctatgaggtggagcgctggatcaaaacggtcaaaggcgagcggttattcctgttccgc
aacaagtttgtccacagcggcagcggcaaaaaagaggtgttcctgatctgttccggcacg
gatatcaccgaagaacgccgtgcccaggaacgcctgcggctattggccaataccgatacc
atcaccggcctgccaaaccgcaacgccattcaggatgatatcaaccgggcgataagcgaa
cgcggtgaaagccacgtagggctggtctatctcgatctggataacttcaaaaaagtgaac
gacgcctatggccatatgtttggcgatcgcttgctgatcgaggtgtcccacgccattctc
agttgcctggatcatggagaaaaacttgcccgtctggggggcgatgaatttctggtgctg
gtcacccaggccgaccggatcatgctgcaagagctggcccagcgcattatcgatcgcttg
caaatgcccttccgcatcggcctgatcgaggtctacaccggctgttcgattggcattgcc
ctctgcccgcaacatggccaggatctggacagcctgatccgcagcgccgataccgccatg
tacgtcgccaaggagcacggcaaacgcacctttatcgtcttctcgccggacatgaaccgc
cgcgttgccgaatacatgtggctggataccaacctgcgtaaggggctggaacaagagcaa
ctggtggtgtattaccaacccaaggtcacaacgctcaacggagccgtgaacagcgtagag
gcgctggtccgctgggattcgccggagcgcgggctgatcccaccgctgcagtttatctcc
tatgccgaagagtccgggctgattgccccacttggccgctgggtgctgcaaaccgccgct
aaacaggctgccatttggcagcagcaggggttgaatttacgcatcgcggttaacctttcc
gccaggcagttggtggatgacagcgtggttgacgatctggttgaggtactgcgagaaaac
cagctttctccctgcactctggactttgagctgaccgagagcagcctgatagaagatgag
aatcgggctcgtgaggtgatcgcccggctacgggccttgggtgcccaggtacacctggat
gattttggcaccggttactcctctctggcccagttggcacgtatcccgctggacgctatc
aagctggatcaaagctttgttcgcggcgtcaatctggccccggtatcacagtcattgata
cgcgccatcgtcgcggtcgccgaagcgctacagttcaaggtgattgccgaaggggtcgag
acggacagtgaaaatcgcttcctggactgcgttggggtcgatgaaaaacagggatttctt
ttcgcccggccgatgctgcccgaacagttggagcagtggctgaaaacctatagcccgcaa
tcaccagagtga
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