Serratia fonticola GS2: AV650_05185
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Entry
AV650_05185 CDS
T04716
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AV650_05185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfg03021
]
AV650_05185
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_05185
Enzymes [BR:
sfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AV650_05185
Transcription machinery [BR:
sfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AV650_05185
DNA repair and recombination proteins [BR:
sfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AV650_05185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ALX92992
UniProt:
A0A0F7H908
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All DBs
Position
1126039..1127028
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcttgctcaacctgaaagggctggcggtgagagttcaagggaaagatgaagttattctt
accctgaataaatctggcattggccctgtgaccgctgccgacattacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccacctgaccgatgagaacgctgctatc
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtctgttggttgacgcctgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtactgacctggacaag
ctggtcatcgagatggaaaccaatggtacgatcgatcctgaagaggcgatccgccgtgcg
gccaccattctggctgaacaactggaagctttcgttgacctacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgttgaaaacgcctaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcttcccgtggactttctctgggcatgcgcctggaaaat
tggccaccggctagcattgctgacgagtaa
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