Serratia fonticola GS2: AV650_05405
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Entry
AV650_05405 CDS
T04716
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg00061
Fatty acid biosynthesis
sfg00071
Fatty acid degradation
sfg01100
Metabolic pathways
sfg01212
Fatty acid metabolism
sfg02024
Quorum sensing
sfg04146
Peroxisome
Module
sfg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AV650_05405
00071 Fatty acid degradation
AV650_05405
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AV650_05405
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV650_05405
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfg01004
]
AV650_05405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfg04147
]
AV650_05405
Enzymes [BR:
sfg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AV650_05405
Lipid biosynthesis proteins [BR:
sfg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AV650_05405
Exosome [BR:
sfg04147
]
Exosomal proteins
Exosomal proteins of breast milk
AV650_05405
Exosomal proteins of breast cancer cells
AV650_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ALX93027
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Position
1180226..1181791
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AA seq
521 aa
AA seq
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MNILNAILAQAEKSPQAAAVIQLHKAEGDHYRETTYYTYEALIDEAQHLSAKLLAHIQEG
ALVGVVMGNTPEWVLADVTLLLANLIEVPVPLAFSGEQAAWLLHNCQVILTDEIGAERLA
QWQHRGLQLTGVVMAVTCGETPTQAQPPRHIAARMAEDTIIKVIHTSGTTSQPKGVQIRR
HGLDALVDALWLHAAKDDYQRYLNLVPLSLLIEQVTALYMPLTSGGAVIMPPRDMPPLGS
PGVTALERLAVLHQASPSSLTLTPALVEALAEKAQAHGDKPGLMTALFGRETVPLLAAGG
APVNTDILLELDRLGIPVYQGYGLSENSSVATWNSRDANRIGTVGKPLAHVEVRISEEGE
LCLRSTSLFAGYSNEDPSSCSIDEDGWLHTGDLATQDDEGYISIVGRKKTMIITANGRNI
SPEWLESAYRTVPGVLQVIVYGDKQQFLSGLFVVDDIAQAQTIRQAIITFARENLNEIEQ
ITDPILLPHSPEITEHLFTVTGRPRRNAVFDFLAQHEIAIA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctgaatgcaattttggcccaggctgaaaaaagtccgcaggcggcagctgtg
atccaactacataaagctgaaggtgatcactatcgggaaacgacatactacacctatgag
gctcttattgatgaggcgcagcatctgagcgcaaagctgttagcgcatatacaggaagga
gctcttgttggcgtggtgatggggaacacgccggagtgggtgctggctgatgtgacactg
ttgttggccaacttgattgaagtcccggtcccgttggcattctcaggtgagcaagcggct
tggttattgcacaactgccaagtcatcttaaccgatgagattggggccgaacgcttagcg
cagtggcagcataggggattgcaactcacaggtgtggtgatggcggtaacctgcggtgaa
acgccgacgcaggcgcagcccccaaggcatattgctgcacgtatggctgaagataccatt
atcaaagtgatccacacatctggtactacttcgcagcctaagggcgtgcagatacgtcgc
cacggtttagatgcgctggttgacgcactttggctgcacgccgcaaaggatgattaccag
cgttatctgaatctggtgccattgagcctgttgattgaacaggtgaccgctctctatatg
ccactgacctccggcggtgcggtgataatgccgccgcgtgatatgcccccgttgggtagc
ccaggagtcacggcgttagaacggttggcggtccttcaccaggcgagcccttcatcgctg
acgttaaccccagcattggttgaggcgttggcagaaaaagcgcaggcacatggcgataag
ccgggcctgatgactgcactgtttgggcgagaaacggtgccgctgttggcagccggtggt
gcaccagttaacacagacatcttgctcgagttggatcggctcggtatcccagtttatcag
gggtatggtttgagcgaaaacagttctgtcgccacctggaactcgcgcgatgccaaccgt
attggcaccgtgggtaagccgctagcacacgtcgaagtcagaatcagtgaagagggggag
ctttgcttgcgtagcacttcactatttgcaggctattcgaatgaagatcccagcagttgc
tcaatcgatgaggacggatggctgcatacgggcgatctggcgacacaggatgacgaaggc
tatatctccatcgttggccgcaagaaaaccatgatcattactgcgaatggacgcaacatc
tcgcctgagtggctggagtcagcctaccgcactgtacccggagttttgcaggtcatcgtc
tatggtgacaagcagcagttcctcagcggcctctttgtggtggatgacattgcacaagcc
caaaccatacgtcaggccatcattacgtttgctcgagaaaatctcaatgagatcgaacag
attaccgatccgatcttactaccacatagccccgaaattacggagcacctgtttaccgtt
actggtcgcccgcgccgtaacgccgtatttgattttttagcccaacatgagattgccata
gcatga
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