Serratia fonticola GS2: AV650_07470
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Entry
AV650_07470 CDS
T04716
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sfg
Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfg03021
]
AV650_07470
Transcription machinery [BR:
sfg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AV650_07470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALX93408
LinkDB
All DBs
Position
complement(1620324..1623230)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ISNHEGWQLQVEEVKEDNGLLTYIGTRLDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRLPFAGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYSEAML
DSSNPFETEQLVICSLDFVRRNKQRLEQLADAHWDLLVVDEAHHLAWSEDAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPSRFHDYQEFVTDQQKYRPVADAVTLLL
SGERLADDKLNLLGELIDEQDIEPLLKAANSDTDNSEQARQELVTMLMDRHGTSRVLFRN
TRNGVKGFPRRHLHQIKLPLPTQYQTAIKVSGIMSAKKTVEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLDYLVANRHEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASQEEGAQVLLCSEIGSEGRNFQFASQMVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQIMVPYLENTAQAVLGRWFHEGLDAFEHTCPTGRPIYDSSYEQLIGYLAAPTEQ
EGLDEFIHACNQQHKQLKMQLEQGRDRLLEMHSNGGDKAQALAEAIAAQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHVMLQQAESLVEEQAR
ALIEQAKQEADDKLSTELARLEALKAVNPNIRDDEVEALEFNRKQVLINLNEAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacggaaagcgaattgggactggga
accgtggtagcactggacgtgcgcatggtcaccctgcttttccccgcaaccggtgaaaac
cgcctctatgccagaaacgactcgccaatcacccgcgtgatgtttaacccgggcgacacc
atcagcaaccacgaaggctggcagttgcaggtggaggaagtcaaagaggataacggactg
ttgacctatatcggcacgcgtctggatacccaggaaagcggcgtcgctatgcgtgaagtg
ctgctggacagcaagctgaccttcagtaaaccgcaagaccgcctgtttgccggtcagatt
gaccgcatggatcgctttgcgctgcgtttccgcgcccgcaaataccagagcgagcagtat
cgcctgccgttcgctggcctgcgcggcatgcgcgccagcctgatcccgcaccaattgcat
atcgcctacgaggtcggccagcgccatgcaccgcgcgttctattggccgatgaagtgggc
ctgggtaaaaccatcgaagccgggatgattattcatcagcaactgctggctggccgcgcc
gaacgcgtgctgatcgtggtgccggaaaccctgcaacaccagtggctggttgaaatgatg
cgtcgcttcaacctctatttctcactgtttgacgatagccgctattccgaagcgatgctc
gacagcagcaacccgttcgaaaccgaacagttggtgatctgctcgctggatttcgtgcgt
cgcaacaaacagcgccttgagcagttggccgatgcccactgggatctgctggtggtagac
gaagctcaccacctcgcctggagcgaagacgcgccgagccgtgaatatcaggtgattgaa
cagttggcggagcacatcccgggcgtactgttgctgacggcaactccggagcagcttggc
cagcaaagccactttgcccgcttgcgcctgctggatcccagccgtttccatgactatcag
gagtttgtcaccgaccagcagaaataccgtccggtagccgatgcggtgacgctgctgctg
agtggcgagcgtctggcagatgacaagttgaacctgctgggtgagctgatcgacgagcag
gacattgagccactgctgaaagcggccaacagcgataccgacaacagcgaacaggcgcgc
caggaactggtcaccatgctgatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtaaaaggcttcccacgccgtcacctgcaccagatcaaactgccgttg
ccaacgcaatatcagacggcgatcaaggtgtccggcatcatgagcgccaagaaaaccgtc
gaagcccgcgcccgcgacatgctctaccccgaacagatttatcaggagttcgaaggggag
aatgcgacctggtggaacttcgatccgcgcgttgagtggctgctggattatctggtcgcc
aaccgtcatgagaaagtgctggtgatttgcgcccaggccgcgaccgctctgcaactggag
caggtgctgcgcgagcgcgaagcgatccgcgccgccgtgttccacgaagggctgagcatt
atcgaacgcgatcgcgccgccgcctacttcgcttcacaggaagaaggcgcgcaggtactg
ctgtgctccgaaatcggttcggaagggcgtaacttccagtttgccagccagatggtgatg
ttcgatctgccgttcaacccggatctgctggaacagcgtattggccgtctggatcgtatt
ggccagatgcacgatatccagatcatggtgccgtacctggaaaacaccgctcaggccgtg
ctgggccgctggttccatgaagggctggatgccttcgagcatacctgtccaactggccgg
ccgatttacgacagcagctacgagcagctgattggctacctggccgcccctaccgagcag
gaaggtctggacgagtttatccatgcctgtaaccagcagcacaaacagttgaaaatgcag
ctggaacagggccgtgaccgtctgctggaaatgcactccaatggcggtgacaaagcgcag
gcgctggcagaagccattgcggctcaggacaacgacgttaacctggtgagctttgcgctc
aacctgttcgatatcgttggcatcaaccaggaagaccgcagcgacaacctgatcgtcctg
accccgtcagaccatatgctggtaccggacttccctgggctaccgcaagatggctgcacc
gtgacgtttgatcgcgagcaggcactgtcgcgtgaagatgcccagtttgtcagttgggaa
catccaattatccgcaacgggctggatctgatcctctccggcgacaccggaagctgtgcg
gtttccctgttgaaaaacaaggcgctgccggtgggcaccctgctggtcgaactggtgtat
gtggttgaggcacaggcccctaaacacctgcagttgacccgcttcctgccgccgacgccg
atccgcatgttgatggatcgcaaggggaccaacctggcggcacaggtcgagttcgaaagc
tttaaccgccaactgaacgcggtcaatcgccacacctccagcaagctggtcaatgcggtg
cagcaagaagtgcacgtgatgctgcaacaggcagaaagcctggtggaagaacaggcccgc
gccctgatcgaacaggccaagcaagaggccgatgacaagctgagtaccgagctggcacgt
ctggaagccctgaaagcggttaacccgaatatccgtgatgacgaagtcgaagcgctggag
ttcaaccgcaagcaggtgctgattaacctcaacgaagcgggatggcggctggatgctatt
cgtctggtagtggtgacacaccagtga
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