Serratia fonticola GS2: AV650_07910
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Entry
AV650_07910 CDS
T04716
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sfg
Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfg03009
]
AV650_07910 (rumA)
Enzymes [BR:
sfg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AV650_07910 (rumA)
Ribosome biogenesis [BR:
sfg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AV650_07910 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Cons_hypoth95
FtsJ
Methyltransf_4
CMAS
Methyltransf_15
Methyltransf_23
DOT1
Motif
Other DBs
NCBI-ProteinID:
ALX93492
LinkDB
All DBs
Position
1727060..1728397
Genome browser
AA seq
445 aa
AA seq
DB search
MAQFYSPKRRVTTRQASQIFTVTVTDLDPFGQGVARHEGKAVFIPGVLPGEQAEIQLTQD
KRQFAKGQLRQLLNCSIQRVEPRCPHFGVCGGCQQQHVSEALQQQSKAAALGRLIYRETG
VTPQQEPVIAGPQYGYRRRARLGLQWQPQQHRLLMGFHQAASSDLVAVKQCPVLAPELER
LLVPLYQCLSGLQAVQRLGHAELVLADNGPVLVLRHLDALKKGDRQALQQFAQQNGTTVY
LAPDSERLEKLCGEAPYYQVDGLRLDFNPRDFIQVNDAVNQQMVAQALEWLEIEPNDRIL
DLFCGMGNFTLPLAKRAKAVVGIEGVATLVANGQYNADRNRLSNVSFFHENLEDDVARQP
WAAQGFDKVMLDPARAGAAGVMSHIVKLAPERVVYISCNPTTLARDSKVLLDAGYRLARV
RMLDMFPHTGHLESMALFIHGSRKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccgaaacgccgcgtgacgacccggcaagcttcacaaatattc
acggtgacggtaacggacctcgatccatttggccagggagtggcacgccatgaaggcaaa
gcggtatttatccccggcgttttgccgggggaacaggccgaaattcagttgacgcaggac
aaacggcaattcgccaaaggtcagctcaggcaactgttaaattgcagcatacaacgcgtt
gagccgcgctgcccacactttggtgtgtgcggaggttgccagcagcagcatgtctccgag
gcgctgcaacagcaaagcaaggcggcggcgctggggcgcctgatctaccgcgaaaccggg
gtgacgccgcagcaggaaccggtgattgccgggccgcagtatggttaccgtcggcgggcg
cggctggggttacagtggcaaccccagcagcaccgtttgctgatgggttttcaccaggcc
gcctcgtccgatctggtggcggtgaagcagtgcccggtattggcaccggaactggaacgg
ctgctggtgccgctgtatcaatgcctgagcggcttgcaggccgtgcagcgtctgggccat
gcggagctggtgttggcggataacggaccggtgctggtgttgcgccacctggatgcactc
aagaagggcgatcgtcaggctttgcagcagtttgcccagcaaaatggcaccaccgtttat
ttggcaccggatagcgaacggctggaaaaactgtgcggtgaagcgccgtattatcaggtt
gacgggctacgcttagacttcaatccgcgcgattttattcaggtaaatgatgcggtaaat
cagcaaatggtggctcaggcccttgaatggctcgagattgagcccaatgatcgcatattg
gatctgttttgtggcatgggcaactttaccctgccgctggccaagcgggccaaggcggtg
gtcgggattgaaggtgttgccacgctggtagcgaatgggcaatataatgccgataggaat
aggctcagtaatgtctcctttttccatgaaaatctggaagatgacgttgcgcgacaacca
tgggcagcacagggatttgataaggtgatgctggatccagcccgcgcaggcgcggctggg
gtgatgtcacacattgtaaaactggcgccagagcgcgtggtgtatatatcctgtaacccc
acgacgttggcacgcgacagcaaagtgttgctggacgccggttatcgtcttgcgcgtgtg
cggatgttggatatgttcccgcacacggggcatcttgaatccatggcgctgtttatccac
gggtcgcggaaaaagtag
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