Serratia fonticola GS2: AV650_10865
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Entry
AV650_10865 CDS
T04716
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg03030
DNA replication
sfg03430
Mismatch repair
sfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV650_10865 (holA)
03430 Mismatch repair
AV650_10865 (holA)
03440 Homologous recombination
AV650_10865 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfg03032
]
AV650_10865 (holA)
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_10865 (holA)
Enzymes [BR:
sfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV650_10865 (holA)
DNA replication proteins [BR:
sfg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AV650_10865 (holA)
DNA repair and recombination proteins [BR:
sfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AV650_10865 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ALX94021
LinkDB
All DBs
Position
complement(2382088..2383122)
Genome browser
AA seq
344 aa
AA seq
DB search
MIRLYPEQLAAQLREGLRACYLLSGNEPLLLQESQDLIRQAAQQQQFTEHYSISLDVHTD
WDAIFSICQAMSLFASRQTLLLIFPENGPTAPIGEQLVKLAALLHDDILLVLRGPRLTKA
QENSAWFKALSANGVMVSCQTPEQAQLPRWVAQRAKSMQLDLDDAANQLLCYCYEGNLLA
LSQALERLSLLHPDGKLTLPRVEQAVNDAAHFSPFHWLDALLAGKSKRAWHILRQLQQED
VEPVILLRTLQRELLMLLNLQRRMAHTPLRTLFDQLKVWQNRRSLITQALQRLSGEQLRQ
AVHLLAQIELTLKKDYGQSVWPELETLSMLLCGKPLATSVTDAY
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtctttatcctgaacaacttgccgcgcagctccgagaggggctgcgcgcttgt
tatttattgagcggtaatgaacccttgttgctgcaggaaagccaggatctgatccgccag
gctgcccaacagcaacagttcaccgagcactacagcatttccctggatgtccataccgac
tgggatgccatcttcagtatctgccaagccatgagcctgtttgccagccggcaaaccctg
ttgctgattttccccgagaacggcccaacggccccgatcggcgagcaactggtcaagctg
gccgctttgctgcatgacgatatcctgttggtactgcgcggcccacgcctgaccaaagcc
caggagaacagcgcctggttcaaggctctcagcgccaatggcgtcatggtcagttgccaa
acgccggaacaggcacagctgccgcgttgggttgcccagcgagccaaatccatgcagctg
gatctcgatgacgcagccaatcaactgctgtgttactgctatgaaggcaacctgctggca
ctttcgcaggcgttggaacgactttcgctgctgcatcccgatggtaaactgacgttgccc
cgcgtagagcaggcagtaaacgatgcagcccacttcagcccgttccactggctggatgcc
ctgctggcaggcaagagcaaacgtgcctggcatatcctgcggcagctccagcaagaggat
gtcgagccggtgatcttgctgcgtaccctgcaacgggaactgctgatgctgctgaacctg
caacgccgcatggcgcacaccccactgcgtacgctattcgatcagctcaaggtctggcag
aaccgccgcagcctgatcactcaggctctacaacgcctttcgggtgaacaattgcggcag
gcagtgcacctgttggcgcaaattgagctcaccctcaagaaagactacggccagtcggtt
tggccggagctggaaaccctgtcgatgctgctctgcggcaaacctctggccacgagtgtc
accgatgcctactag
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