Serratia fonticola GS2: AV650_11180
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Entry
AV650_11180 CDS
T04716
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sfg
Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_11180
Enzymes [BR:
sfg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AV650_11180
DNA repair and recombination proteins [BR:
sfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AV650_11180
Prokaryotic type
AV650_11180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALX94074
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Position
2448896..2450320
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AA seq
474 aa
AA seq
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MTTHLVWLRNDLRITDNKALSAACSDPQAKVLAVFIATPAQWRQHHMAPRQAAFIHANLL
QVQAALAARGIELICHQGDDFAGSVNWLVEFCQRQQVTALYYNRQYEINERQRDARLEQA
LAGQVRFHSFDDSLLLPPGSVQTGNGEMYKVYTPFRKAFLQRLAESDVSSLPAPRPRGEA
VGFTAAAVFDYPLAEVGEGYPAGEEAALHRLRAFCRERVQDYATQRDLPAIAGTSNLSPY
LAIGVISPRQCVNRLRVECPDVLENPQSGAFCWLNELIWREFYRHLMVAYPALCKHRPFI
AWTDKVCWQRNDAALLAWQQGNTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLVKDLLID
WRAGEQYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPKGTFIRKW
LPELANVPDNELHQPHRWAEKQQQVLNYPPPIVQHQQARLETLAAFEAAKRGGL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggttgcgtaacgatctacgcattaccgacaataaagccctc
tctgccgcctgtagcgatccgcaagccaaggtgctggcggtatttatcgccacccctgcg
caatggcgccagcaccatatggcgccacgtcaggcagcgtttattcacgccaatctgctg
caggtgcaagcggcgctggcggctcggggcattgaactgatttgccatcagggcgacgat
tttgccggttcggttaactggctggtggagttctgccagcgccagcaggttacggcccta
tattataatcgtcagtatgaaatcaatgagcgtcaacgtgacgcccgccttgagcaggcg
ttggccgggcaggtgaggttccacagctttgatgatagcctgctgttgccccccggcagc
gtgcaaaccggcaacggcgagatgtacaaggtgtatacgccttttcgcaaagcttttctc
cagcggttggccgagtccgacgtgagctctctgccagcaccacgcccgcgtggggaagcc
gttggttttaccgcagcggcggtattcgattatcctttggctgaggtgggagagggctat
cccgcaggcgaagaggctgcattacacaggttgcgcgctttctgccgcgagcgggtgcaa
gactatgcgacacagcgcgatttgcctgccattgccggcaccagcaatctgtcaccctac
ctggctattggcgttatctctccccgccagtgcgtcaaccgtctgcgcgtcgagtgcccc
gatgtgctggaaaatccgcaaagcggtgctttctgttggcttaatgagctgatctggcga
gagttttatcgtcacctgatggtggcgtatcctgcgttatgcaagcaccgtccctttatc
gcctggacggataaggtatgctggcaacgcaacgacgcggcgttactggcctggcaacag
ggtaataccggttacccgattgtcgatgcagccatgcgtcagctcaatcaaaccggctgg
atgcataatcgcctgcggatgatcgtggccagcttcctggtcaaggatttgctgatcgac
tggcgcgccggtgaacagtatttcatgtcccaattgttggatggcgatctggccgccaac
aacggtggctggcagtgggccgcctctaccggtaccgatgccgcaccttatttccgcatc
tttaacccgaccactcagggcgaacgttttgatccaaaaggcacttttatccgtaaatgg
ttgcctgaactggcgaatgtaccggacaatgagctccatcaaccccatcgctgggcggaa
aagcagcagcaggttctgaattatccgccgccgatagtccaacaccagcaggctcggctg
gagacgttggcggcttttgaagcggccaagcgagggggactttaa
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