Serratia fonticola GS2: AV650_12840
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Entry
AV650_12840 CDS
T04716
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sfg
Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfg03009
]
AV650_12840 (rimO)
Enzymes [BR:
sfg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AV650_12840 (rimO)
Ribosome biogenesis [BR:
sfg03009
]
Prokaryotic type
ribosomal protein modification factors
AV650_12840 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
ALX94386
LinkDB
All DBs
Position
complement(2813341..2814672)
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AA seq
443 aa
AA seq
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MSQTMTPKAPRVGFVSLGCPKNLVDSERILTELRNEGYQVVPRYDDAELVIVNTCGFIDS
AVQESLEAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVP
KPEHNPFTSLTPAQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEA
KRLVESGVKELLVISQDTSAYGVDVKHRTGFWNGQPVKTSMVSLCEQLSSLGAWVRLHYV
YPYPHVDDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPEL
TLRSTFIVGFPGETEEDFQMLLDFLTEAKLDRVGCFKFSPVEGAAANELADPVPEEVKEE
RFHRFMQLQQQISAQRLQDKIGREVLVLIDEVDEEGAIGRSMADAPEIDGAVYLNGEANV
KVGDIVKVKIENADEYDLWGSKV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaactatgaccccaaaagccccccgtgtcggctttgtctcactaggttgcccg
aaaaacctggttgattctgaacggatcctgactgaactgcgtaacgaaggttaccaggta
gtgccccgctatgatgatgctgagctggtgatcgtgaacacctgcggctttatcgacagc
gccgttcaagagtcactggaagcaatcggtgaagccttgaacgagaatggcaaggtgatt
gtgaccggctgccttggtgccaaggaaaaccaaatccgtgaggtgcatccgaaggtcctg
gaaattaccgggccgcacagctacgaacaggttttgtcccacgttcaccaatatgtgccg
aaaccggagcataacccctttaccagcctgaccccggcgcagggcgtgaagctgacgcca
aagcactacgcctacctgaagatttccgaaggctgtaaccatcgctgcaccttctgcatc
atcccatcgatgcgtggtgacttggacagccgcccgatcggctccgtgctggatgaagcc
aaacgcctggtggaatctggggtgaaagagctgctggtgatctcacaagacacctcggcc
tacggcgtcgatgtcaaacaccgtaccggtttctggaacggccagccggtaaaaaccagc
atggtcagcctgtgtgaacagctttccagcctgggtgcctgggtgcgtctgcactacgtt
tacccttacccgcacgtggatgacgtgatcccgctgatggccgaaggcaagatcctgcct
tatctggatattccactacagcacgccagcccgaaaatcctcaagctgatgaaacgccca
ggcgcggttgagcgcacgctggagcgtatcaagcgctggcgcgaaatctgcccggagctg
acgctgcgctccacctttatcgttggcttccctggggaaaccgaagaagacttccagatg
ctgctggacttcctgactgaagccaagctggatcgcgttggctgcttcaagttcagcccg
gtagaaggtgctgccgctaatgaactggctgacccggtgccagaagaagtgaaggaagaa
cgcttccatcgctttatgcagctgcagcagcaaatctccgcccaacgcttgcaagacaag
attggccgcgaagtgctggtgctgatcgacgaagtggatgaggaaggtgctattggccgc
agcatggcggacgcaccggaaatcgacggcgcggtctacctcaacggtgaagccaatgtc
aaagtcggcgacatcgtcaaagtgaagattgagaacgccgacgagtacgatctctggggt
tccaaggtctga
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