KEGG   Serratia fonticola GS2: AV650_13525
Entry
AV650_13525       CDS       T04716                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sfg  Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:sfg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfg03400]
    AV650_13525 (helD)
Enzymes [BR:sfg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AV650_13525 (helD)
DNA repair and recombination proteins [BR:sfg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AV650_13525 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD AAA_11 ResIII
Other DBs
NCBI-ProteinID: ALX94516
LinkDB
Position
2976403..2978457
AA seq 684 aa
MELKATSLGKHLAQHPYNRVRLLHAGVEVSGEKHEYLIPFNQLIQVRCKRGIVWGELEFE
LPDEKVVRLHGTEWQETQRFYHYLQQSWQQWSSEMSEVSAEVLQQQVDHIRQIEQQDKWF
KRTELSSLQQQIRQSFGALPMPVARLEEFENCRESYHLCLQWLKSGMRSVAQRNQRWCDR
MLETHQDFFQTVETSPLNESQSRAVVNGEDAVLVLAGAGSGKTSVLVARAGWLLLRQEAE
PEQILLLAFGRKAAEEMNERIQERLGSVAIQAKTFHALALQIIQQGSRKAPVISKLESDS
KARRTLLITHWQQQCSEKKAQAKGWRQWLTEELEWELPEGDFWHDRRLAERLSGRLERWL
GLMRTHGGSQAEMIEQADEDIRDLFSKRIRLMAPLLKAWKTALKDEGAVDFAGLIHQAVN
LLEKGRFISPWKHILVDEFQDISPQRAQLLAALRKQNKQTSLFAVGDDWQAIYRFSGAEL
SLTTAFAENFGVGEQCALDTTYRFNDRIGEVANGFIQQNPHQLKKPLNSLTKGNKKSVVI
LPQEQLEALLDKLSGYAKPQERILVLARYHHLKPEVLQKAATRWPKLNIEFMTIHASKGQ
QADYVIIAGLYEGKDGFPAEVRESVLEEVLLPQPEDFPDAEERRLLYVALTRARHQVWLL
QDRERPSVFIEQLQEIGVPSQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcgctgggcaagcacctggcacagcatccttacaaccgcgta
cggttgttgcatgccggggttgaggtgagcggcgagaagcatgaatacctgatccctttc
aaccagttgattcaggtgcgttgtaaacgcgggatcgtctggggggagctcgagttcgaa
ctgccggatgaaaaggttgtgcgcctgcacggtaccgaatggcaggaaacccagcgcttt
taccactatctgcagcagtcttggcagcagtggagcagcgagatgagtgaagtgagcgcc
gaagtattgcaacagcaggtcgatcatatccgccaaatcgagcaacaggacaagtggttc
aaacgtaccgaattgagcagcttgcagcagcagatccgccagtcgtttggcgcattgccc
atgccggtggcgcggctggaagagtttgaaaactgccgtgaaagttatcacttgtgcctg
cagtggctcaaatctggtatgcgcagcgtggcgcaacgcaatcagcggtggtgcgaccgg
atgctggaaacccaccaggatttcttccagacagttgaaacgtcaccgttgaatgaatcg
caaagccgggccgtggtgaacggcgaggatgccgtgctggttctcgcaggagccggtagt
ggcaagacctcggtgctggtggcgcgggcggggtggctgctactgcgtcaagaggccgag
cctgagcagatcctgttgttggcatttgggcgcaaagccgccgaagagatgaacgaacgc
atccaggaacgtttgggcagcgtggcgatccaggcgaaaacgttccatgcgctggcgctg
cagattatccagcagggcagccggaaagcgccggtgatcagcaagctggaaagcgacagt
aaagcgcgcaggacgttgctaattacccactggcaacagcagtgcagcgagaagaaagca
caggccaaaggctggcggcaatggttaacggaagagctggagtgggaattgcctgagggc
gatttctggcatgaccggcgtctggcagagcgtttgagtgggcgcctggagcgctggctt
ggcttgatgcgcacccacggaggtagccaggccgaaatgatagagcaggccgatgaagat
atccgcgacctgttcagcaaacgcattcgcctgatggcaccgttgctgaaagcgtggaaa
accgcgctgaaggatgagggcgcggtcgattttgccgggctgatccatcaagccgttaat
ctgctggaaaaggggcgctttatcagcccgtggaagcatattctggtggacgagttccag
gatatctcaccacagcgtgcgcaactgctggcggcactgcgtaagcaaaacaagcagacc
agcctgtttgccgtcggcgatgattggcaggcaatttaccgtttcagcggggcagagctg
tcgctgaccaccgcctttgccgagaactttggcgtaggcgagcagtgtgcgctggatacc
acctaccgctttaacgatcggatcggtgaggtggccaacggctttatacagcagaacccg
caccagttgaaaaaaccgcttaatagcctgaccaagggcaacaagaagtcggtggttatc
ctgccgcaggagcagttggaagcgttgctggacaagctaagtggctatgcgaagccgcaa
gaacggatcttggtgctggcgcgctaccaccatctcaagcctgaggtgttgcaaaaggcg
gcaacgcgttggccgaagttgaatatcgagtttatgaccattcatgccagcaaaggccag
caggctgactacgtgatcattgccgggctgtatgaaggcaaggatggattcccggcggag
gtccgtgaatccgtgcttgaagaggttttattgcctcagcctgaggatttcccggatgcg
gaggagcggcgtttgctctatgtcgccctcacgcgggccaggcatcaggtttggttatta
caagatcgcgaacgcccgtcggtatttatcgagcagttgcaagagattggcgtgccgtcg
caaagaaagccgtaa

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