Serratia fonticola GS2: AV650_18430
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Entry
AV650_18430 CDS
T04716
Name
(GenBank) transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
sfg
Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfg03000
]
AV650_18430
Transcription factors [BR:
sfg03000
]
Prokaryotic type
Helix-turn-helix
Other families
AV650_18430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA_5
Sigma54_activ_2
AAA
AAA_22
Mg_chelatase
NACHT
RuvB_N
AAA_2
AAA_14
AAA_16
IstB_IS21
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ALX95405
LinkDB
All DBs
Position
complement(4006453..4009263)
Genome browser
AA seq
936 aa
AA seq
DB search
MKRKDAVRQELERLTLTLNRETLEQSAGGFAAETIAFNLGLARNSVSKDLNELHAERLVI
KIKSRPVLFLHRAVCEQLIEQSLPDDRLEAKDLLALLPAKALPQPASDDPFHTVIGYDRS
LRLSVEKGKAAVLYPGGLHVLLTGPSGVGKTFFAEVMHQFAMVQQPQRQIPLVYFNCAEY
AHNPELLSSHLFGHKQGAFTGAIESKRGLIEQADGGFLLLDEVHRLPYEGQEKLFSILDK
GEYRPLGSSEKARPISVRLICATTESPDSTLLRTFLRRIQVSIAIPALRERSLEEQVEII
TGFLQLESRKIGRIIRLDKGLLLYLLEKPLSGNIGQLKSDIQFLCAQAWASGMGHSSPRL
LLDKRLMDVPHSASASSRLLVDALFGQQEYLDISSQPLEQLKQHLSALSSEQDSDLFYTY
LTREYVNLRNSNVPPQETLSILKNKLRTIFEYGLYSRNGGESEERYYGGQVEQRITLLIG
CIEQVLGFPLPQNMAGHLRKHLLALLSYVQKGLIPNLYSSSLILDYCKDEYDNANQLCRK
INEIFHIQCPSTEIVYLCLFLKECRSFRQRKEVSPDCGAMLIGHGTTTASSMAHYVNRVL
ECELFTAIDMPFEQSVHDTLELLIATLREKRYQRLILIVDIGSLVHFASTVSKLFHIDVL
LIQNITMGALLEIGLDLTYETSDFTPLMELMASKGIAHQLYDQREDEIGKVLAISCITGM
GTTVKIKKVLEESFGELMAEDTRMVLVDYNEVRSLERLRHAIGGNERLVGIVGTFQPGLP
DIPFIALEELFSEQGPELVLSLLNPDLGSAERQLQVERCSMRFISALTLESIINHISVLN
PQRILQEIEAVLHQICRTLDLQPSRQVTLRFLIHCCCMVERIVLSHKPLQIALDAQQDID
QQAFSVIKDAFSPIERAYSIRLSDAEYFYIYELLYR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaaagatgcggttcgccaggagctggaacgtcttacccttacgcttaaccgg
gaaacgcttgaacaaagcgctggcggttttgccgcggaaaccatcgcttttaacctggga
ttggcacgtaactctgtcagtaaagatctcaacgagctacacgctgagcgattggtcatc
aagattaaatcccgtccggtgctgtttttgcaccgggcagtctgtgagcagttgattgag
caatcgttgccagatgacaggctggaagccaaagatttactggcgctattacccgccaaa
gccttgccgcagccagccagtgatgatccttttcatacggtgattggctatgaccgcagc
ctgcggttgtcggtagagaagggtaaggcggcggtgctttatccaggtggattgcatgtg
ttgcttaccgggccttccggggtggggaaaaccttctttgccgaggtgatgcaccaattc
gccatggtgcaacagccccagcggcaaatcccgttggtgtatttcaactgtgccgagtat
gcccataacccggagctgctttcatcccatctgtttggtcacaaacagggcgcgtttacc
ggcgcgattgaaagcaaacgtggcctgatcgaacaggcggacggtggctttctgttgctc
gatgaagttcaccgcttgccctatgaagggcaggagaaactgttttcgatcctggataaa
ggtgaatatcggccactgggttcaagcgagaaagcccgacccattagcgtacggctgatc
tgcgctaccactgaaagcccagactcaacgctgctacgtactttcctgcggcgtattcag
gtatcgattgccataccggcgttgcgggagcgctcattggaggaacaggtagaaatcatt
accggtttcttacagcttgagagccgcaagattggccgcattatccgtttggataagggg
ttgctactctatctgctggagaagccactgagcggcaatatcggccaactcaaaagtgat
atccagtttctctgtgcccaggcctgggccagcggtatgggacacagtagcccgaggctg
ttgctggataagcggctgatggatgtcccgcactctgctagcgcaagcagtcgcctgctg
gttgatgcgctatttggtcagcaggagtatctggatatcagttcacagcctcttgagcag
cttaagcagcatctgagcgccttgagcagcgagcaggacagcgatctgttttacacctat
ctgacgcgcgaatacgtcaacctgcgcaatagcaacgtgccgccgcaggaaaccctgtcg
atcctgaagaacaagctacgcaccatttttgaatatgggctatacagccgcaacggtggg
gaaagtgaggagcgctattatggcggccaggtcgagcaacgcattacgttgttgattggc
tgcattgaacaggtgttgggtttcccgctaccacagaatatggccggccatctgcgtaaa
cacctgctggcgctgctttcctatgtgcagaaaggcctgatccccaacctgtactcctcc
agcctgatcctggattactgcaaggatgagtacgataacgccaaccagctatgccgcaaa
atcaatgaaatcttccacatccaatgtccgtcgacggaaatcgtctacctgtgcctgttt
ttgaaggagtgccgcagtttccgccagcgcaaggaggttagccctgactgcggtgccatg
ttgatcggccacggcaccaccacggccagcagcatggcgcactatgtcaatcgggtgctg
gaatgtgagctgtttaccgccatcgatatgccgttcgagcagtcggtgcatgacacattg
gaattactgatcgccacactgcgggaaaaacgctatcagcgcttgatcctgattgtggat
atcggctcgttggtgcactttgccagcaccgtcagcaaactgttccacattgatgtgctg
ctgatccagaacatcaccatgggggcgttgctggagattgggctggatctgacctatgaa
accagtgatttcacccccttgatggaactgatggccagcaaagggattgcccatcagctt
tacgaccagcgtgaagatgagatcggcaaggtgttggcaatctcctgtattaccgggatg
ggcacgacggtgaagatcaagaaagtgctggaggaaagcttcggtgagctgatggcggaa
gacacccgcatggtattggtggattacaacgaagtgcgcagcctggagcgattgcgtcat
gcgataggcggtaacgaacgtctggtgggtatcgtggggaccttccagcccggcttgccg
gatatcccgtttatcgcgttggaagagctgttctccgaacaggggccggaactggtgctc
agcctgttgaacccggaccttggcagcgccgaacgccagttgcaggtcgagcgctgttca
atgcgttttatcagcgcgctgacgctggagagcatcatcaaccatatttccgtgctcaat
ccccaacgtatcctgcaagagatcgaagcggtgttgcatcagatttgtcgcacgctggat
ttacagccctcaaggcaagtgacacttcgcttcctgatccactgctgttgcatggtggag
cgtatcgttttaagccacaaaccgttacagattgccctggatgcccagcaggatatcgac
caacaggcgttttctgtcatcaaagacgcgttttcgccgattgagcgtgcctattctatc
cgcctgtccgatgcggaatatttttatatctacgagcttctctaccgctaa
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