Serratia fonticola GS2: AV650_19465
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Entry
AV650_19465 CDS
T04716
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg00300
Lysine biosynthesis
sfg00470
D-Amino acid metabolism
sfg01100
Metabolic pathways
sfg01110
Biosynthesis of secondary metabolites
sfg01120
Microbial metabolism in diverse environments
sfg01230
Biosynthesis of amino acids
Module
sfg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AV650_19465
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AV650_19465
Enzymes [BR:
sfg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AV650_19465
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ALX95594
LinkDB
All DBs
Position
complement(4234435..4235598)
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AA seq
387 aa
AA seq
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MTVEFNSLLSMCNEEDYFYVIDLDSIERGVRKFKSHWESYFPRLDIAYSYKSNNLSMVTK
LMLREGFSAETVSLHEIKLALDDGFVGKNIFFDGPVKLDSEIEFAISKGIKIQCDNILEL
ERVILLSNHIGLKPKISFRLSTDYKSMGLSRFGMSRDEFYESLLLLQEYSLHLCGVHIHA
GSNLASHDYLIKALEYYSDEISKVKDNLHFVDIGGGYPASTANCDADFINENYPKHVAKA
ILKQGIDINKVSIVIEPGRVLTEDYGYLISGISSVKQRSDMNILTISAPGTSVRSAQYHN
NRCVCIIPQRDETVETSLAHVFGSNCYESDIIAMNMPIPVDLSLDDKVLISSCGSYDIMN
SSSWIRNKPKLIIISNGECYHENYRPA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgagtttaattctttattaagtatgtgcaatgaagaagactatttttatgtt
atagatctagactctatcgagaggggtgtccgtaaatttaaatctcactgggagtcttat
tttccaaggttagatattgcatactcgtataaaagtaacaacttgtcaatggtgacaaaa
ttaatgctacgtgagggtttttctgctgagactgtatcacttcacgaaataaaacttgct
ttagatgatgggtttgtcggtaagaatattttttttgatggaccagtaaaattagatagt
gaaattgaatttgccatatcaaagggtattaaaatacagtgtgataatattcttgagtta
gagcgggttatacttctttcaaaccatattggattaaagccaaagatatcattccgtcta
agtaccgattataaatcgatgggtttatctcgtttcggaatgagtcgagatgaattttat
gaatcattattgttactccaggaatatagccttcatctttgtggtgtacacattcatgca
ggctctaatcttgcatctcatgactatctgataaaagcattagaatattattctgatgaa
atatctaaggtgaaagataatttgcactttgtcgatattggaggaggttaccctgcatct
acagcaaattgtgatgctgattttatcaatgaaaattatccaaagcatgtggcgaaagcg
attttaaagcaaggtatagatatcaataaggttagtattgtaattgagcctggtagagtt
ttaactgaagattatggatatttgatttctggaatttcttcagtaaaacaacggagcgat
atgaacatcctcactatttcggcaccaggtacaagtgtgagatctgcacagtatcataat
aatagatgtgtttgtatcattcctcagagagatgaaactgttgagactagcttagcacat
gtttttggatcaaattgctatgagtctgatatcattgcaatgaatatgccaataccagtt
gacctttctcttgatgataaagtattaatatcatcatgtgggagttatgacataatgaat
tcatcgagttggattagaaataaacccaagttaattattatctctaatggggagtgttac
catgagaattaccgacctgcctga
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