Serratia fonticola GS2: AV650_21450
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Entry
AV650_21450 CDS
T04716
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg00040
Pentose and glucuronate interconversions
sfg01100
Metabolic pathways
sfg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AV650_21450
Enzymes [BR:
sfg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
AV650_21450
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Paralog
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Motif
Pfam:
PelX_N
Pel9A-like_beta_helix
PelX_Ig
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ALX97327
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All DBs
Position
complement(4671910..4673958)
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AA seq
682 aa
AA seq
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MSLLIALASVCHHAVAAPLPAANELVWQAIAFGQSTDVNFATNVLPEKVGTNQVTMANGK
PMQAGPLKMPFHVESRGGKIGNSHDGLTFYYTRVPANANVVLEAEVTVDQFGPENMALPA
GQEGAGLLIRDILGKPRLEKVQQGYEEFPAASNMVMNAIMTQDKKDHQRVKMTLISRNGV
LNSWGNAGVEIKREGYQPEVDLQKTPTFRLRLARTDQGFTAAYAPLGSDNWVSKTTNDPH
RVTKLDPEGYYVGFFASRNARITVNQASLTLSESQLPAAQEFAVKAMPLQIEIGSAPISA
TDDYVFQLRSNESGTLSLSQDGVVIAAERKVQAGEMLAVKVALKKAETVLDYRFTTVKGN
AQSDKLMVRKAHYADAANLYAAPQGKAENDGSQQHPLDFATAVQSLTPGGTLWLAAGDYP
LAVIPALASGTATHAKKLRPLGDGVVLHGMELAASYWDIQGITVTEKSLRITGSHNHLDR
VVAHHADDTGIVISSPANADRPLWASHNLISHSESYANKDPGLINADGFAVKMRVGEGNR
LVACFSHDNVDDGFDLFNKIEDGPNGKVIIENSVALRNVNNGFKLGGEGLPVAHQVTNSL
AIENGMDGFTDNFNPGALQVTSNMAIDNQRFNYIFRPGPYTTQDKQGVFSGNVSLRSKPG
EYADAVVGNIADNNAFLLPVAP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
ctgtcgttattaattgctctggccagcgtgtgtcatcacgctgtcgccgcaccgctgcct
gccgctaatgaactggtttggcaagccatcgctttcggccagtcaacggatgtcaacttt
gccaccaatgtgctgccggaaaaagtgggcaccaatcaggtgacgatggccaatggcaag
ccgatgcaggccgggccgttgaaaatgccgttccacgtcgaaagccgggggggcaaaatc
ggcaacagccatgatggcctgaccttctactacacgcgcgttcccgcgaatgccaatgtg
gttctggaggcggaggtgacggtcgatcagtttggcccggaaaatatggccctgcccgcc
gggcaagagggggcgggattgctgatccgcgatatcctcggcaaaccacggttggagaag
gtccagcagggttatgaggagtttccggcggcatccaacatggtgatgaatgccatcatg
acgcaggataaaaaagatcatcagcgggtcaaaatgacgctgatttcccgcaacggcgtg
ctcaattcctggggtaacgcgggcgtcgagatcaaacgcgagggttatcaacctgaggtc
gatctgcagaaaacgccaaccttccggctgcgtctggctcgcacggatcaggggtttacc
gcggcctatgctccgctgggcagcgacaactgggtcagtaaaacgaccaacgatccgcac
cgcgtcaccaagctggatcctgaaggttactacgtgggcttttttgcttcacgtaacgca
cgcattaccgtcaaccaggccagcctgacgctcagcgaaagccagcttccggcggcacaa
gagtttgcggttaaagcgatgccgctgcagatcgagatcggttctgcgccaatatccgcc
acggatgattacgtcttccaactacgcagcaatgagagtggcactctgtcgctgagccag
gacggcgtggtcattgccgcagagcgtaaggtacaggccggagagatgctggcggtgaag
gttgcgctgaagaaggcggaaaccgtgctggattaccgtttcactacggtaaaaggcaac
gctcagagtgacaagctgatggtgcgcaaagcgcactatgccgacgccgctaatctgtat
gctgcgccacagggcaaagccgaaaatgatggtagtcagcagcatccgctggattttgcc
accgccgtgcaatccttgacgccgggtggcacgctttggctggcggcgggggattacccc
ttggctgtcatacctgccttagccagtggcaccgccacgcatgccaaaaagctccggccg
cttggggatggcgtggtgctgcacgggatggaactggcagccagctattgggatattcag
ggcatcacggtaacggaaaaaagcctgcgcattacgggtagccataaccaccttgaccgg
gtggtggcacaccatgcggatgataccggaattgtcatttcttccccggctaacgccgac
cggccactgtgggccagccacaacctgataagccattccgaatcatacgccaacaaggat
ccaggtctgatcaatgcggatggttttgccgtcaaaatgcgtgtgggcgagggaaatcgg
ctggtcgcctgcttctcgcatgacaacgtggatgacggctttgatctgtttaacaagatc
gaggatggcccgaacggcaaggtgatcattgagaacagcgtcgcgctgcgcaatgtcaat
aatggtttcaaactggggggagaagggttgccagtggcccatcaggtgactaacagcctc
gccattgaaaacggcatggatgggtttaccgacaacttcaaccctggcgccctgcaagtc
accagcaatatggcgattgataaccagaggtttaactacattttccgtccgggcccctat
accacgcaggacaagcagggcgtattcagtggcaacgtctcgctgcgtagcaagccggga
gaatatgccgatgcggtggtggggaacatcgccgacaacaatgcctttttgttgccagta
gctccttaa
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