Entry |
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Name |
(GenBank) ATP-dependent RNA helicase SrmB
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KO |
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Organism |
sfg Serratia fonticola GS2
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Brite |
KEGG Orthology (KO) [BR:sfg00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:sfg03009]
AV650_23805
Enzymes [BR:sfg01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AV650_23805
Ribosome biogenesis [BR:sfg03009]
Prokaryotic type
rRNA helicases
AV650_23805
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
5184688..5186004
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AA seq |
438 aa
MTATNFSELELDERLILALRDKGYDRPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RTQTLLFSATLEGEAIREFAERILKDPVEVEADPSRRERKKILQWYYRADDVKHKTALLV
HLLQQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIDELRPSTKVPSEKSNGKPSKKVLAKRIEDKLKNKEKAKVKVRHR
DAKNVGKRRKPKAKPDAE |
NT seq |
1317 nt +upstreamnt +downstreamnt
atgacagcaaccaatttttccgaactcgaactcgatgagcgcctgatcctcgctttgcgt
gataaaggctacgatcgccccaccgctatccaggccgaggcgatcccgccagctatggac
gggcgcgacgtattaggttcggcaccgaccggcacgggcaaaaccgccgcattcttgctg
ccggttctgcaacatctgctggatttcccacgcaagaagtctggcccaccgcgcgtactg
atcctcaccccgacgcgtgagctggcaatgcaggtggccgatcaggctcgtgaattggct
gcgcatacctcgctggatatcgccaccatcaccggcggcgtggcgtatatgaaccacgcc
gaagtctttagcgaaaaccaggacgtggtggttgccaccaccggccgcctgctgcaatac
atcaaagaagaaaactttgactgccgcgcggtagaaacgctgatcctggacgaagccgat
cgcatgctcgatatgggctttgcgcaagacatcgagaccatctcggccgaaacccgctgg
cgtacccagacgttgctgttctccgcaacgttggaaggcgaagcgatccgcgagtttgcc
gagcgtatcctgaaagatccggttgaggttgaagccgatccttcccgccgcgaacgtaaa
aagatcctgcaatggtattaccgcgccgatgacgtgaagcataaaaccgccctgctggtg
catctgttgcaacagccggacgtgcagaagtcagtgatctttgtacgtaagcgtgagcgc
gtgcatgagctggccgcctggctgcgtgaagcaggcatcaacacctgctatctcgaaggg
gaaatggtgcaggccaagcgtaacgaagcggtaaaacgcatgatggatggccgcgtcaac
gtgctggtcgctaccgacgttgcagcacgcgggctggatatcctggatatcacccacgtg
ttcaacttcgatatgccgcgcactgccgatacctatctgcatcgcattggccgtactggc
cgtgccgggcgtaaaggcaccgccatttcgctggtagaagcgcacgaccatctgctgctg
ggcaaagtggggcgttacctcaatgagccactgaaagcccgcgtgatcgacgaactgcgt
ccatccaccaaggtgcctagcgagaagagcaacggtaagccctcgaagaaggtgctggcc
aagcgcatcgaagacaagctgaagaacaaagagaaggccaaggtgaaggtacgccatcgc
gacgcgaaaaacgtcggtaagcgccgcaagccaaaagccaaaccagacgcagaataa |