KEGG   Serratia fonticola GS2: AV650_23805
Entry
AV650_23805       CDS       T04716                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
sfg  Serratia fonticola GS2
Brite
KEGG Orthology (KO) [BR:sfg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfg03009]
    AV650_23805
Enzymes [BR:sfg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AV650_23805
Ribosome biogenesis [BR:sfg03009]
 Prokaryotic type
  rRNA helicases
   AV650_23805
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 AAA_22 AAA_11
Other DBs
NCBI-ProteinID: ALX96372
UniProt: A0AAW3WKD9
LinkDB
Position
5184688..5186004
AA seq 438 aa
MTATNFSELELDERLILALRDKGYDRPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RTQTLLFSATLEGEAIREFAERILKDPVEVEADPSRRERKKILQWYYRADDVKHKTALLV
HLLQQPDVQKSVIFVRKRERVHELAAWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIDELRPSTKVPSEKSNGKPSKKVLAKRIEDKLKNKEKAKVKVRHR
DAKNVGKRRKPKAKPDAE
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgacagcaaccaatttttccgaactcgaactcgatgagcgcctgatcctcgctttgcgt
gataaaggctacgatcgccccaccgctatccaggccgaggcgatcccgccagctatggac
gggcgcgacgtattaggttcggcaccgaccggcacgggcaaaaccgccgcattcttgctg
ccggttctgcaacatctgctggatttcccacgcaagaagtctggcccaccgcgcgtactg
atcctcaccccgacgcgtgagctggcaatgcaggtggccgatcaggctcgtgaattggct
gcgcatacctcgctggatatcgccaccatcaccggcggcgtggcgtatatgaaccacgcc
gaagtctttagcgaaaaccaggacgtggtggttgccaccaccggccgcctgctgcaatac
atcaaagaagaaaactttgactgccgcgcggtagaaacgctgatcctggacgaagccgat
cgcatgctcgatatgggctttgcgcaagacatcgagaccatctcggccgaaacccgctgg
cgtacccagacgttgctgttctccgcaacgttggaaggcgaagcgatccgcgagtttgcc
gagcgtatcctgaaagatccggttgaggttgaagccgatccttcccgccgcgaacgtaaa
aagatcctgcaatggtattaccgcgccgatgacgtgaagcataaaaccgccctgctggtg
catctgttgcaacagccggacgtgcagaagtcagtgatctttgtacgtaagcgtgagcgc
gtgcatgagctggccgcctggctgcgtgaagcaggcatcaacacctgctatctcgaaggg
gaaatggtgcaggccaagcgtaacgaagcggtaaaacgcatgatggatggccgcgtcaac
gtgctggtcgctaccgacgttgcagcacgcgggctggatatcctggatatcacccacgtg
ttcaacttcgatatgccgcgcactgccgatacctatctgcatcgcattggccgtactggc
cgtgccgggcgtaaaggcaccgccatttcgctggtagaagcgcacgaccatctgctgctg
ggcaaagtggggcgttacctcaatgagccactgaaagcccgcgtgatcgacgaactgcgt
ccatccaccaaggtgcctagcgagaagagcaacggtaagccctcgaagaaggtgctggcc
aagcgcatcgaagacaagctgaagaacaaagagaaggccaaggtgaaggtacgccatcgc
gacgcgaaaaacgtcggtaagcgccgcaagccaaaagccaaaccagacgcagaataa

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