Serratia fonticola GS2: AV650_23825
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Entry
AV650_23825 CDS
T04716
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AV650_23825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_23825
Enzymes [BR:
sfg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AV650_23825
DNA repair and recombination proteins [BR:
sfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AV650_23825
Prokaryotic type
AV650_23825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALX96376
LinkDB
All DBs
Position
5188675..5189358
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AA seq
227 aa
AA seq
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MSTSLTWHDVIGKEKEQPYFLDTLAFVANERQAGKTIYPPQKDVFNAFRFTELADVKVVI
LGQDPYHGPNQAHGLSFSVRPGIPAPPSLVNMYKELVTDIPGFERPTHGCLQSWAEQGVL
LLNTVLTVEGGRAHSHANLGWETFTDKVIAALNENREGVVFLLWGSHAQKKGSFIDRQRH
HVLKAPHPSPLSAHRGFLGCRHFSQTNQLLEQQGLAPIDWVPHLPQE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctccctcacctggcacgacgtcatcggcaaagagaaagagcagccctacttt
ctcgatacactcgcctttgtagctaatgaacgccaggctggtaagaccatttacccacca
cagaaagatgtgtttaacgctttccgctttaccgagttggcggacgtcaaagtggtgatc
ctggggcaagatccctatcacggcccgaaccaggcccatggcctgtcgttttccgtgcgt
ccaggcatccctgcaccgccttcactcgtcaatatgtacaaagagctggtgacggatatc
cccggctttgagcgcccgacacacggctgcctgcaaagctgggccgagcaaggcgtactg
ctactcaataccgtattaaccgttgaaggtggccgggcgcattctcacgccaatctgggc
tgggagacctttaccgacaaggttattgccgcgctaaacgaaaatcgcgagggtgtcgtg
ttcctgctgtgggggtcacacgcacaaaagaaagggagctttatcgatcgccagcgccat
catgtgttgaaagcgccgcatccctccccactttctgcccatcgtggtttcctgggttgc
cgccacttttcgcaaaccaatcagttactggaacaacaaggcctggcaccgattgactgg
gtgccgcacctgccgcaggagtga
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