| Entry |
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| Symbol |
dnaE
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
sfg Serratia fonticola GS2
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sfg00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV650_24430 (dnaE)
03430 Mismatch repair
AV650_24430 (dnaE)
03440 Homologous recombination
AV650_24430 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:sfg03032]
AV650_24430 (dnaE)
03400 DNA repair and recombination proteins [BR:sfg03400]
AV650_24430 (dnaE)
Enzymes [BR:sfg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV650_24430 (dnaE)
DNA replication proteins [BR:sfg03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AV650_24430 (dnaE)
DNA repair and recombination proteins [BR:sfg03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AV650_24430 (dnaE)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(5312327..5315815)
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| AA seq |
1162 aa
MAEPRFIHLRVHSDYSMIDGLAKIGPLVKRAAALAMPALAVTDFTNMCGLVKFYGSAHGA
GIKPIIGADFRVQSEELGDELAQLTVLAADNVGYQNLTLLISRAYQRGYGPAGPVIDRDW
LIEHRSGLILLSGARMGDVGKFLLRGNQALVDQCLEFYQQHFPDSYYLELIRTGRADEEN
YLHAAVALATERGLPVVATNDVRFLVEDDFDAHEIRVAIHDGFTLDDPKRPKNYSPQQYM
RSEEEMCELFADIPEALLNSVEIAKRCNVTIRLGEYFLPQFPTGDMTTEDFLVLKSKEGL
EERLEFLFPDPEVRAERRPEYDERLDLELKVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKTGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELSVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGQYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNSGEQGYFKDLFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAAL
MNSLGDALKAADQHAKAEAIGQADMFGVLAEAPEQVEQSYANVPPWQEQVVLDGERETLG
LYLTGHPITQYLKEIERYAGGQRLKDMHPTDRGKMTTAVGLVIASKIMMTKRGNRIGICT
LDDRSGRLDIMLFTDALEKYQHLLEKDRILIATGQVSFDDFNGGLKMTARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGATWRVTP
TDRLLIDLRTLVGNEQVELEFD |
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| NT seq |
3489 nt +upstreamnt +downstreamnt
atggccgaacctcgttttattcatctgcgcgtccacagtgactactccatgattgatgga
ttggccaagatcggcccgttggtgaaaagagctgccgcgttagccatgccagccttggcc
gtcaccgacttcaccaatatgtgtggtctggtgaaattttatggcagtgcgcacggtgcc
gggatcaaaccgatcatcggtgcggatttccgtgtgcaaagcgaggagctgggcgatgag
ctggcacagcttaccgtgctggcagccgataacgttggctatcaaaacctcaccctatta
atctccagggcgtatcagcgcggctatggcccggccggtccggtgatcgatcgcgactgg
ctgatagaacaccgcagcgggttgatcctgctttccggtgcacgcatgggcgacgtcggc
aagtttctgctgcgtggcaaccaggccctggtcgatcaatgcctggagttttaccagcag
catttcccagacagctattatctcgaactgatccgcactggccgtgcggatgaagaaaac
tatctgcacgccgccgtagccctggcaaccgaacgtgggttgccggtagtcgccaccaac
gacgtccgtttcctggtggaagatgattttgatgcccatgagatccgcgtagcgatccat
gatggcttcacgctcgacgatcccaaacgcccgaaaaactacagcccgcagcagtacatg
cgcagcgaagaggaaatgtgcgagctgtttgccgacatcccggaagcgttgctaaacagt
gtggaaattgccaagcgctgtaatgtcaccatccgtttgggcgaatatttcctgccacag
ttccccaccggcgatatgaccaccgaagatttcctggtgctcaagtccaaagaggggttg
gaagaacgtctggagttcctgttcccagatccggaggtccgtgccgagcgccgccctgaa
tacgatgagcgtctggatctggaactgaaagtgatcaaccagatgggattcccgggttac
ttcctgatcgtcatggaattcatccagtggtcgaaagataacgacgtgccggtaggcccg
gggcgtggttccggtgccggttcgctggtggcctatgcgctgaaaatcaccgatctcgac
ccgttggagtttgaccttctgttcgaacgcttcctgaacccggaacgtgtctcgatgccc
gacttcgacgtcgacttctgcatggaaaagcgtgacctggtcatcgagcacgtggcggac
atgtatggccgtgaggcggtatcgcagatcatcaccttcggtaccatggcggcgaaagcg
gtgatccgcgacgtgggtcgcgtgctggggcatccttatggcttcgttgaccgtatctcc
aagctggtgccgcccgatccgggcatgacgctggaaaaagcctttgccgcagagccgcag
ctgccagaaatctatgaggcagacgaagaggtcaaagcgctgatcgacatggcgcgcaag
ctggaaggcgtgacgcgtaacgccggtaagcacgccgggggcgtggtgattgcgccaacc
aagatcaccgactttgccccgctttattgcgatgccgaaggtaaccacccggtcacccag
tttgacaagaacgacgtggaatacgccgggctggtgaagttcgacttcctcggtctgcgt
accctgaccatcatcgactgggcgttggagatgattaacgcccgtcgcgccaagaccggg
ttggaaccgatagatatcgcggccattccgctcgatgacaagaaaagcttcgacatgttg
caacgctcggaaaccactgcggtattccagcttgaatcgcgcggcatgaaggatttgatc
aaacgtctgaagcctgactgcttcgaagacatgatcgcactggtagcgctgttccgcccc
ggcccgttgcagtccggcatggtagataactttatcgaccgcaagcacgggcgcgaagag
atctcctatcctgatatccagtggcagcatgaatcgttgaagccagtgctggagccgacc
tatggcatcatcctgtaccaggaacaggtaatgcagatcgctcaggtattagctggctat
acgctgggtggtgcggacatgctgcgtcgcgccatgggtaaaaagaacccggtcgagatg
gccaagcagcgcggcggttttgaagatggtgcgaaatcgcgcggcattgacggcgaactg
tcggtaaaaatcttcgatctggtagagaagttcgcgggttatggctttaacaaatcgcac
tccgctgcctatgcgttggtgtcttaccagacgctgtggctgaaggcccactatccggcc
gaatttatggccgcggttatgaccgccgatatggataataccgataaggtggtggggctg
gtggatgagtgctggcgcatgggcctgaaaatcctgccgccggacatcaacagcgggcag
tatcacttccacgttaatgatgagggcgagatcgtctatggcatcggcgccatcaagggc
gtgggggaagggccgatcgaagcaattatcgaagcgcgtaattccggcgagcaggggtat
ttcaaagatctgttcgacctgtgcgcccgctccgatattaaaaagctcaaccgccgtatc
ctggaaaagctgatcatgtctggggcgttcgatcgcctggggccacaccgcgccgcgttg
atgaactccctgggggatgcgcttaaagcggccgatcagcacgccaaagccgaagccatc
ggccaggcggatatgtttggcgtgctggcggaagcgccggaacaggtggagcaatcctac
gccaacgttcccccttggcaggaacaggtggtgctggatggtgaacgggaaacgctgggg
ctgtatcttaccggccacccgatcactcagtacctcaaagaaatcgagcgctatgccggt
ggccagcgcctgaaagatatgcatccgacggatcgcggcaagatgactactgccgtcggg
ttggtgattgcttccaagatcatgatgaccaaacgcggcaaccgcatcggcatttgtacg
ctggatgaccgttcagggcgtctggacatcatgttattcaccgatgccttggaaaaatac
cagcatttgttggaaaaagaccgtatcctgatcgcgactggacaggtcagctttgatgac
tttaacggcgggcttaaaatgaccgctcgtgaattaatggacatcagtgaagcacgtgaa
aaatacgctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttg
aaccgtctccgtcagtctttggaaccccatcgctcggggacgattccagtgcatctctac
tatcaacgggaagatgcacgggcaagattgcgctttggtgcaacttggcgcgtgacgccg
accgaccgcttgttgatagatttgcggaccttggtaggtaatgagcaggtggaactggaa
tttgactaa |
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