Sinorhizobium fredii HH103: SFHH103_00220
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Entry
SFHH103_00220 CDS
T01731
Symbol
secD
Name
(GenBank) Protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh02024
Quorum sensing
sfh03060
Protein export
sfh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SFHH103_00220 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SFHH103_00220 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFHH103_00220 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfh02044
]
SFHH103_00220 (secD)
Secretion system [BR:
sfh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SFHH103_00220 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF6484
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
CCE94724
UniProt:
G9AAU4
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All DBs
Position
237207..239741
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AA seq
844 aa
AA seq
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MRTSRWAVLAYVAIIIFGCLAAVPSVLTPAMREQFASVLPFKPVTLGLDLRGGSHLVLEV
DGAGLQKARLNSLLDDTRRVLRGERVSASSARISGNSVTVSVTDAADREKVLPKLQELAA
PVGTVGFGGSAAELEVATNGDVIALAMTEAGLSDRMTKAVEQSLEIIRNRVDQVGVAEPL
IQRIGSDRILVQLPGLQDPTRLRELLGSTAQMSFHMLDQTVDITQPAPRGVDILPGADDG
NKYPVESRIAISGERLEDAKVGFDQRTNQPVVDFAFDSLGARQFADITRENVGRPFAIVL
DGKVLTAPVINEPILGGRGQISGNFTVEEATVLSALLRSGALPAPLTIIEERSVGPNLGS
DSIRMGLYTGLAGFGLVVTLMVVLYGAWGMIANVGLVLHTIMTIGVLGLIGSTLTLPGIA
GIILGIGMAVDANILINARIREETEAGAGAMKALDVGFNKAYATILDSNVTTLAGTVLLF
WLGSGPVRGFAVTMMLGIIISMFTSVTVVRLLMREVVVRRKMKKLEIPSLFGRVPHLPTF
SFMKRRFQAIGFSAFLSISSVILFFTPGLNYGIDFIGGIQVEAVSKDKIDLPTLRHSLEE
LNLGEVALQDFGGGQSVLVRVQRQPGGEQEQTAALSRIKDAVTTAIPGASMERTEVVGPT
VSGELARSGFLAVGLAMVAILLYIWFRFEWHFAVGAIAVLLLDITKTVGFFALTGIDFNL
TAIAALLTMIGYSVNDKVVVYDRMRENLRKYKSMPFSDLIDMSINQVIARCIFTSMATAL
SLVPMAIWGGEAVRSFAWPMIFGVIVATTSSIYIGGPILLFLSRWWKDREAGRSAAQQPG
TPAV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacatccagatgggcggttctcgcctatgtcgcgatcattatcttcggatgcctc
gcggcggtgccgagcgtcctgacgccggccatgcgggagcaattcgcttccgtccttcct
ttcaagccggtcaccctcggcctcgaccttcgcggcggttcgcacctcgtgctcgaggtc
gacggggcggggctgcagaaggctcgcctcaactcgcttctcgacgacacgcggcgcgtc
ctgcgcggcgagcgcgtctccgcctcttcggcgcgcatcagcggcaacagcgtgacggtg
agcgtcacggacgctgccgaccgtgaaaaggtgctgccgaagctgcaggaactcgcggca
cccgtcggtacggtcgggttcggcggctccgctgctgagctcgaggtggcgacgaacggc
gacgttatcgcgctcgccatgacggaggcaggcctttcggatcgcatgaccaaggcggtc
gagcagagccttgaaatcatccgcaaccgcgtcgaccaggtcggtgtcgccgagccgctg
atccagcgcatcggctcggaccgcattctcgtgcagctgccgggcctccaggatccgacg
cgccttcgcgagctgctcggctcgacggcgcagatgagcttccacatgctcgaccagacc
gtcgacatcacgcagcctgccccgcgcggcgtcgatatcctgccgggcgccgatgacggc
aacaaatatccggtcgaaagccgcatcgctatttccggcgaacggctcgaagacgcgaaa
gtcggcttcgaccagcgcacgaaccagccggtggtggatttcgccttcgactcgctcggt
gcccgccagttcgccgacatcacccgcgaaaacgtcggccgtccctttgccatcgtcctc
gacggcaaggtcctgacggctccggtcatcaacgaaccgattctcggcggacgcggtcag
atcagcggcaacttcaccgtcgaggaggcaacggttctctcggcgctgctgcgctccggc
gccctgccggcgccgcttaccatcatcgaagagcgctcggtcggaccgaacctcggcagc
gactcgatccgcatgggtctctacacgggtcttgccggtttcggtctcgtggtgacgctg
atggtcgtcctttacggtgcctggggcatgatcgccaatgtcggcctggtgctccacacc
atcatgacgataggcgttctcggcctgatcgggtcgacgctgaccctgcccggcatcgcc
ggtatcattctcggcatcggtatggcggtcgatgccaatatcctgatcaacgcgcgtatc
cgcgaagaaacggaagcgggcgccggtgcgatgaaggcgctcgatgtgggcttcaacaaa
gcctatgcgaccatcctcgattccaacgtcacgacgcttgccggcacggtgctcttgttc
tggctcggcagcggcccggtccgcggtttcgcggtcacaatgatgctcggcatcatcatc
tcgatgttcacttcggtaaccgtcgtgcgcctgctgatgcgcgaggtcgtcgtgcgccgc
aagatgaagaagttggagatcccgtcgctcttcgggcgcgtcccgcatctgccgaccttc
tccttcatgaagcggcgcttccaggcgatcggcttttcggcgttcctgtcgatcagctcg
gtcatcctgttcttcacgccgggcctcaactacggcatcgacttcatcggcggtatccag
gtcgaggcggtatcgaaggacaagatcgacctgccgacgctgcgacacagcctcgaagag
ctcaatctcggcgaggtcgcgctgcaggacttcggcggcggccagtcggtgctggttcgc
gtccagcgtcagccgggcggcgagcaggagcagacggcggcgctgagccgcatcaaggat
gccgtgacgaccgccatccccggcgccagcatggagcggaccgaggttgtcggtccgacg
gtcagcggcgagcttgcgcgatcgggcttcctcgccgtcggcctcgccatggtggcgatc
ctgctctacatctggttccgcttcgaatggcacttcgctgtcggcgcgatcgcggtgctt
ttgctcgacatcaccaagaccgttggcttcttcgcgctgacgggcatcgacttcaacctg
acggcgatcgccgcattgctgacgatgatcggctactcggtgaacgacaaggtggtggtc
tacgaccgcatgcgcgagaacctgcgcaagtacaagtcgatgccgttctccgatctcatc
gacatgagcatcaaccaggtgatcgcgcgatgcatcttcacctcgatggcgacggcgctt
tcgctggtgccgatggccatttggggcggtgaggcggtgcgcagcttcgcctggccgatg
atcttcggcgtcatcgtcgcgacgacctcgtcgatctatatcggcggcccgatcctcctg
ttcctcagccgttggtggaaggatcgcgaggccggccgttccgccgctcagcagcccggc
acgccggcagtctaa
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