Sinorhizobium fredii HH103: SFHH103_00227
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Entry
SFHH103_00227 CDS
T01731
Symbol
rkpA
Name
(GenBank) type I polyketide synthase RkpA
Organism
sfh
Sinorhizobium fredii HH103
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
ADH_zinc_N_2
ADH_zinc_N
PS-DH
KAsynt_C_assoc
PKS_DH_N
adh_short
ADH_N
PP-binding
Thiolase_N
CurL-like_PKS_C
SDR
ACP_SdgA_C
Epimerase
GDP_Man_Dehyd
SAT
Motif
Other DBs
NCBI-ProteinID:
CCE94731
UniProt:
G9AAV1
LinkDB
All DBs
Position
complement(247166..254668)
Genome browser
AA seq
2500 aa
AA seq
DB search
MTVEIIGRACLAPGAQSPQALFKILRQGMCTVSSVPGDRWDLARFWHPVMGTPGKTYSFA
AGVLDTIYDFDPAVFGMSQREAMYMDPQQRVLLQLAWRALEDANISVASLHGENVGVYIG
ASSLDHANLTVEDPAAAGPYFMTGNTLSIVSNRISHVFGLSGPSMTVDTACSSSLVALDQ
AMRALNAGEIDTAIVGGVNILAHPLPFVGFAQARMLSPEGLCRAYDNDGAGYVRAEGGVV
FVLRRSDRARRERDRSYARIVASGTNSAGRTNGISLPSREAQANLLKAIYEGNGIDANQV
AFVEGHGTGTKVGDPAEVWSIGTVIGARRRAPVPIGSIKSNIGHTEPASGLFGMMKAVLA
LEHNYLPASLHFDTPNEHIDFEGLNVRVTANPIELLKGKRARLAGINSFGFGGANAHVVI
SDPDPVQQEKASAASSGHVFLASAHTQSSLENLLKDYKGSFANASKEETRAIIAASGANR
THMRHRFAARSDHPEDIVRAIASHLDNPGSDIGEVGEAPVKNAQVAFVFSGNGSQWAGMG
ADAFRENLHFRQSFTSVSALFKFHSDIDLKDLLTDPELDKKLADTKIAQPLLFAIQAALS
DSLVAMGVKPAAVFGHSVGEIAAAYAAGALTLVDAVSIVAKRSLHQDLLAGQGTMAAVML
GEEAAAAFAEARGLDEVCVAAVNAHNSVTISGPAHEVTAFRDAARKAKIPVQILDINYPF
HHPIIDQAKEAFLADIPDIAPRRTELTYLSTVTGSALDGTELDPDYWWKNVREPVRFQAA
TDAALALGCRLFIEISPRPILASYVKETIKQAAAPATVVATLLRDAAEKGQDPISASMAR
AVAHGAAVDRPRAYGKRDAFIELPSLPFEPVELRPQATTDATDLFGRSSKPYRLTGWRGD
PNSGSWKNHVDAHLFPDLAEHVVDGKAILPGSGFIEIAVSAAQQYYGSDEVEITNLEIVR
PLELSDSRIMELSTILSPETGDIEIRSRERLSEDDWTVHAVARSRKPIAGANARHPSISG
LAKTGIVTPAKAYDTAKQFGLDYGPHFQLLAKAVAYGDRLIEVELKAPTGSGHPLVTYAL
HPISVDATFHGLVALFDRFTGEKGGAPYIPVRFGSVRVVNAGRPIARATIEIERVSANSI
KARFHFYDAAGEPIAHFDDCRFRRTYLRKHKTLDGLSFHYETVLSDVILPGAKLAGTVPA
KLSEPADAGTGVDNATLLFNAAIYRACHEIALKLARGKSTIQGNGLPGDFAFQCFLTNCL
YALEDAGLCEHQNGNWKVAPEFTLPTVAEILGELYGERPDRAVEAVLINNAHAEALSRLA
TLLAGTADGEAAAFNAGFISEATLDHQAVHSVSSRSRMDQVLGMVERALAAQVRGARLRI
VELGSVSAGFTRRLADLAARHGTTLSVVEPRDNAQRNLEIAFEEEAHVRILKKSEFAAIG
PFDLAVSASDNLYQLVEEEAGIRTALRSTLRENGALVAAVSAPSIFSDFALGLSEGWFER
SQTAEFPIGKRAAVSHWQKCLADLELSDVSVSDCECPHGNAILIEARGTAGAARPPASHA
GGIPYLLIETDVRRSSAPAGAIPVAASGDLAADIAVLGTAIDGLGEKPVRAVFVSATADH
IGDDDSALLQTHVLALSAFAEALKQRAGNAELVGEARPRLVLVAPGGGPVSESASSGVNS
GLWTFVRVLQNEYEFLDVHSLDLADRTASYEEMLASALPLLAIEGSNREWLLDRATGLVS
EIRAVSGPAAKSEGKISAFSAATIRQRVSSQVSSITWEETDVPRAGPGEIVVSVAATGLN
FRDVMWAMGLLPEEALEDGFAGATIGMELSGHVVEVGEGVDDLAVGDAVMAIASAAFSTH
AVVSRAGVAKLPQTISPVAAATLPVAFLTAYYAMVELGRIRSGETILIHGAAGGVGLAAL
QVAKLKGAKVIATAGTREKRRFLTMLGADHVFDSRSLGFVNDVRAVTGGEGVDLVLNSLF
AEAMEQSLALVKPFGRFLELGKRDYYADSKIGLRPFRRNVSYFGIDADQLLVNQPELTKR
IFMEIGELFDQGRLTPLPYRAFDFDEIGNAFRLMQNAGHIGKIVVLPPVAGQHEIAAKPR
RGMKVDPDGMHLVVGGIGGFGLVAANWLVEKGARNIALCSRRGQPDAATSAMVDRWKKAG
VAASLHACDVTDAAAVEALLASLRAQAPLRSIVHAAMVLDDALISNLTHERNRPVIDVKA
KGAAILDRLTRQDALDNFILFSSATTLVGNPGQANYVAANGYLEGLARARRAAGLAGLAV
GFGAIADAGYLTQNADVNDLLAKRIGKTALKAHVALDMVESHIAADPGGVDAAVVMISEI
DWGAARNLPVARNALFEVILRSADQHASGTEGTKMDLVAMIEGKSPQEAEDILFDLVAGE
IAAILRVAKDTVTRSKILKEIGLDSLMAVELGISFQQNTGFDMPLSGVADNTTVGDVARK
LYEKVSKRDQSDDGEAGDDKLVTELTQRHVGAAKEKALSQ
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgaaatcatagggcgtgcatgcctggcacctggagcgcaatcgccgcaggcg
ctcttcaaaatccttcgtcaaggcatgtgcaccgtctccagcgtgccgggcgatcgttgg
gacttggcgcgcttctggcacccggtgatgggaacgccgggcaagacctattcgttcgcc
gccggcgttctcgacacgatctacgatttcgacccggccgtgttcggcatgtcgcagcgc
gaggccatgtatatggacccgcagcagcgggtgctgctgcagcttgcctggcgcgccctc
gaggacgcaaatatctcggtcgcatcgctgcacggcgagaatgtcggcgtctatatcggc
gcgtcgagcctcgatcacgccaacctgacggtcgaagacccggcagccgccggcccctat
ttcatgacgggcaacacgctctcgatcgtctccaaccgcatttcgcacgtcttcgggctg
agcggcccgagcatgaccgtcgataccgcctgttcttcctcgctggtcgcgctcgaccag
gcgatgcgggcactcaatgccggcgagatcgatacggcgatcgtcggcggcgtcaacatt
ctcgcccatccgcttcccttcgtcggcttcgcccaggcacgcatgctgtcgccggagggg
ctctgccgcgcctatgacaatgacggcgccggctatgtcagggccgagggcggcgtcgtc
ttcgtcctgcggcgctcggaccgggcgcgtcgggaaagggaccggagctacgccaggatc
gtcgcttccggcaccaactcggccggtcgtaccaacggcatctcgctgccttcgcgcgag
gcacaggccaatctgctcaaggcaatctacgagggcaacggcatcgacgccaatcaggtg
gccttcgtcgagggccacggcacgggcaccaaggtcggcgacccggcggaagtgtggtcc
atcggcacggtcatcggcgccaggcgccgggccccggtgccgatcggctccatcaagtcg
aatattggccataccgagccggcctcgggcctgttcggcatgatgaaggccgtgctggcg
ctcgagcacaactatcttccggcctcgctgcacttcgacacgccgaacgagcacatcgac
ttcgagggcctcaatgtccgcgtcaccgccaatccgatcgaactcctgaagggcaagcgc
gcgcggctcgccggcatcaattccttcggcttcggcggcgccaacgcgcatgtcgtcatc
agcgatcccgatccggtccagcaggaaaaggcctcggccgcatcgtccggacacgtgttt
ctcgcaagcgcccatacgcagtcgagcctcgaaaacctgctcaaggactacaaagggtcc
ttcgcgaacgcttcgaaggaagagacgcgcgccatcatcgccgcctcgggcgcgaaccgc
acccacatgcgccaccgctttgcagcgcgcagcgatcatcccgaagacatcgtccgtgcg
atcgccagccacctcgacaatccgggttcggatatcggcgaagtcggcgaagcgccggtc
aagaatgcgcaggtcgcgttcgtcttctccggcaacggctcgcaatgggccggcatgggc
gccgatgccttccgcgaaaacctgcacttccggcagtccttcacctccgtcagcgcactc
ttcaagttccactccgatatcgatctcaaggatctgctgaccgatccggaactggacaag
aagctcgccgacaccaagatcgcccagccgctgctgttcgcgatccaggctgcactttcc
gactcgctcgtggcgatgggtgtcaagccggccgccgtgttcggccattcggtcggcgag
atcgccgcagcctacgcggccggcgccctgacgctggtcgatgccgtgtcgatcgtcgca
aagcgctcgctgcaccaggacctgctggcgggccagggtacgatggcagccgtgatgctc
ggcgaggaggcggcggccgccttcgctgaggcgcgcggcctcgacgaagtctgcgtcgca
gccgtgaatgcgcataattcggtgacgatttccgggccggcgcacgaggtcaccgccttc
cgcgacgccgcccgcaaggcgaagatcccggtccagatcctcgacatcaactacccgttc
caccatccgatcatcgatcaggcgaaagaggcgttccttgccgatattcccgatatcgcc
ccgcgccggacggaactgacctatctctcgacggtcaccggcagcgctctcgacggcacg
gagctcgatccggactattggtggaagaacgtccgcgagccggtgcgcttccaggcggcc
accgacgcggcgctcgcgctcggctgccggttgttcatcgaaatctctccgcgaccgatc
ctcgcttcttacgtcaaggagacgatcaagcaggcggcggctccggcaacggtggttgcg
accttgcttcgcgatgccgcggagaaggggcaggacccgatctcggcatcgatggcgcgg
gctgtcgcacacggtgcagcggtcgaccggccgcgcgcctacggcaagcgcgacgccttc
atcgagctgccgagcctgccgttcgagccggtcgagctgcgcccgcaggccaccacggac
gcgaccgatctcttcggtcgctccagcaagccttaccgccttacgggctggcgcggcgac
cccaacagcggcagttggaaaaaccatgtcgacgcgcatcttttcccggatctcgccgaa
cacgtcgtcgacggcaaggcgatcctgccgggcagcggtttcatcgagatcgccgtctcc
gcggcgcaacaatattacggcagcgacgaggtcgagatcaccaatctcgagatcgtccgg
ccgctcgaactcagcgacagccggatcatggaactctcgaccatcctgtcgccggagacg
ggggacatcgagatccgttcgcgcgagcgcctgtcggaggacgactggacggtccatgcg
gtggcgagaagccgcaagccgatagccggcgcaaacgcaagacacccatcgatcagcggc
cttgccaaaacaggcatcgtcacgccggcaaaggcctatgacacggccaagcaattcggg
ctcgactacggcccgcatttccagttgctggccaaggcggtcgcatacggggaccggctg
atcgaggtcgagctgaaggcccccaccggatcagggcatccgctcgtcacctatgcactc
catccgatctctgtcgacgcgaccttccacgggctggtggcgctcttcgaccgcttcacc
ggcgaaaagggcggcgcgccctatattccggtccgcttcggttcggtgcgtgtcgtcaac
gcaggaaggccgattgcccgtgcgacgatcgagatcgagcgcgtcagcgccaattcgatc
aaggcaaggttccatttctacgatgcggccggcgagccgatcgcgcatttcgacgattgc
cgtttccgccggacctatctgcgcaagcacaagacgctcgacgggctgtccttccactat
gagaccgttctgtccgacgtgatcctgcccggcgcgaagcttgccgggactgtcccggcg
aagctgtcggaaccggccgacgccggcaccggcgtcgacaatgcgacgctgctcttcaat
gcggccatctatcgcgcctgtcatgagatcgcgctcaagctggcgcgcgggaagagcacg
atccagggcaatggcttgccgggcgatttcgcgtttcaatgcttcctgacgaactgcctc
tatgcgctcgaggatgccgggctctgcgaacaccagaacggcaattggaaagtcgcgccg
gagttcacgcttccgaccgtcgcagagatccttggcgagctctacggcgagcgtcccgat
cgcgccgtggaagcggtgttgatcaacaacgcccatgcggaagcactgagccgtctcgcc
acgctgttggccggaacagccgacggggaggccgcggccttcaacgccggcttcatcagc
gaggcgacgctcgatcaccaggccgtccattcggtgtcgagccgttcgcgcatggatcag
gtcctcggcatggtcgaacgcgccttggccgcacaggttcgtggcgctcgcctgcgcatc
gtcgagttgggcagtgtctcggcgggcttcacgcggcgtctggccgatctggcggcccgg
catgggacgaccctttccgtcgtcgagccgcgcgacaacgcccagcgcaatctcgagatc
gccttcgaagaagaagcgcatgtgcgcattctgaagaagagcgaattcgccgcgatcggg
cccttcgacctcgccgtcagcgcctcggacaacctgtaccaactggtcgaagaggaagcc
ggcatccgcaccgcgctgcggtcgacattgcgggaaaacggcgccctggtcgctgccgtc
agtgcgccgtcgatcttcagtgacttcgccttgggcctctccgaaggctggttcgaacgc
agccagacggcggagttcccgatcggcaagcgcgccgcggtttcgcactggcagaagtgt
ctggccgatctcgagcttagcgacgtcagcgtcagcgattgcgagtgcccgcacggcaat
gcgatcctgatcgaggcgcgcggcacggccggcgcggcacggccgccggcaagccacgct
ggcggaatcccctatctgctgatcgaaacggacgtccggcgcagttcggctcccgctggc
gccatcccggttgccgcctcgggcgacctggctgccgatatcgccgtgctcgggacagcg
atcgacgggctcggcgaaaagccggtccgcgcggttttcgtctctgcgacggcagaccac
atcggcgacgacgattccgccttgctccaaacccacgtgctggcgctcagcgcctttgcc
gaagcgctgaagcagcgcgccgggaacgccgaactcgtcggagaggcgcgtccccgcctg
gtgctggtggcgccgggcggcggtcccgtctcggaatcggcgagctcgggcgtgaattcc
ggattgtggacattcgtccgcgtgttgcaaaacgagtacgaattcctcgacgttcattcg
ctcgatctcgccgatcgaaccgcgagctatgaggagatgctcgcctcggcattgccgctg
ctcgccatcgagggttccaaccgtgaatggctgcttgatcgggcgaccggcctggtctcg
gaaatccgcgccgtatctggccccgccgccaagagcgaaggcaagatcagcgctttctcg
gcggctacaattcgccagcgcgtcagttcacaggtcagcagcatcacctgggaagaaacc
gatgtgccacgggcgggacccggggagatcgtcgtctccgtcgccgccaccgggctcaac
ttccgcgacgtcatgtgggcgatgggcctgctgccggaagaggcgctcgaagacggcttc
gccggcgcgacgatcggcatggagctttccggccatgtggtcgaagtcggcgaaggggtt
gacgatctcgccgtcggcgacgcggtgatggcaatcgcgtccgccgccttctcgacgcat
gcggtcgtctcccgggcgggcgtcgccaagctgccgcagacaatcagcccggtggcggcc
gccaccctgccggtggcgttcctcaccgcctattatgcgatggtcgagctcggacgtatc
cggtcgggcgagacgatcctcatccacggcgccgccggcggcgtcggcctcgccgcactc
caggttgccaaactgaagggtgccaaggtcatcgcgacggccggaacccgcgaaaaacgg
cgtttcctgacgatgctcggcgccgatcacgtcttcgattcccggtcgctcggcttcgtc
aacgacgttcgtgccgtcaccggcggcgaaggggtggacctcgttctcaactcgctgttc
gccgaagcgatggagcagagcctcgcgctcgtcaaaccgttcgggcggttcctggaactc
ggcaagcgcgactattacgccgacagcaagatcggcctcaggccgttccgccgcaacgtc
agctatttcggcatcgacgcggaccagctcctcgtcaatcagccggagctgaccaagcgg
atcttcatggagatcggcgaactcttcgaccagggcaggctgacgccgcttccctaccgc
gccttcgatttcgacgaaatcggcaatgcgttccggctgatgcagaatgccggccatatc
ggcaagatcgtcgtgctcccgccggtcgccggccagcacgagattgccgcgaagccgcgc
cggggcatgaaggtcgatccggatggcatgcatctcgttgtcggcggtatcggcggcttc
ggccttgtcgcggcgaactggctcgtcgagaaaggggcgcgcaacatcgcgctctgttca
cgccgcggccagccggatgccgcaaccagcgcgatggtcgaccgctggaagaaggccggc
gtggcggcgtcgctccacgcctgcgatgtcaccgatgccgctgcggtggaagcgcttctc
gctagcctgcgggcgcaagcgccgctgcgctcgatcgtgcacgcggcgatggtgctcgac
gatgcgctgatcagcaacctgacgcacgagcgcaacagaccggtcatcgacgtcaaagcg
aagggcgcagcgatcctcgaccgcctgacgcgccaggacgcgctcgacaacttcatcctg
ttctcctcggcaacgacgctcgtcggcaatccgggccaggcaaactatgtggccgccaac
ggttatctcgagggcctcgcccgcgcccgtcgcgcggcggggctggcagggctggccgtc
ggtttcggcgccatcgccgatgcaggttatctgacgcagaacgccgacgtgaacgacctg
ctcgcaaagcgcatcggcaagacggcgctcaaggcccatgtggcgctcgacatggtggag
agccatatcgccgccgatccgggcggcgtcgacgcggccgtcgtcatgatctccgaaatc
gactggggtgcggcgcgcaacctgccggttgccagaaatgccctcttcgaggtcatcctg
cgcagtgccgaccagcacgcctccggcaccgagggcaccaagatggacctcgtggcgatg
atcgagggcaagtcgccgcaggaggcggaggatatcctgttcgacctcgtcgcgggcgag
atcgccgccattcttcgggtggccaaggatacggtgacgcgcagcaaaatcctgaaggaa
atcggtctcgacagcctgatggcggtggaactcggcatcagcttccagcagaataccggg
ttcgacatgccgctcagcggcgtcgctgacaacacgaccgttggcgacgtcgcgcgcaag
ctttatgaaaaggtcagcaagcgcgatcagagcgacgatggcgaagccggcgacgacaag
ctcgtcaccgaactgacgcaacgccatgtcggagcagccaaggaaaaagcactgagccaa
tga
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