Sinorhizobium fredii HH103: SFHH103_00475
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Entry
SFHH103_00475 CDS
T01731
Symbol
groel1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFHH103_00475 (groel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfh03019
]
SFHH103_00475 (groel1)
03110 Chaperones and folding catalysts [BR:
sfh03110
]
SFHH103_00475 (groel1)
03029 Mitochondrial biogenesis [BR:
sfh03029
]
SFHH103_00475 (groel1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfh04147
]
SFHH103_00475 (groel1)
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SFHH103_00475 (groel1)
Messenger RNA biogenesis [BR:
sfh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SFHH103_00475 (groel1)
Chaperones and folding catalysts [BR:
sfh03110
]
Heat shock proteins
HSP60 / Chaperonin
SFHH103_00475 (groel1)
Mitochondrial biogenesis [BR:
sfh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SFHH103_00475 (groel1)
Exosome [BR:
sfh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SFHH103_00475 (groel1)
Exosomal proteins of other body fluids (saliva and urine)
SFHH103_00475 (groel1)
Exosomal proteins of breast cancer cells
SFHH103_00475 (groel1)
Exosomal proteins of colorectal cancer cells
SFHH103_00475 (groel1)
Exosomal proteins of bladder cancer cells
SFHH103_00475 (groel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CCE94975
UniProt:
G9A174
LinkDB
All DBs
Position
complement(534581..536218)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVSEVVKDLQAKAKKINTSEEVAQVGTISANGEKQIGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLDDVFVLLHEKKLSNLQAMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKSDIEGRVSQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITVKGENDDQEAGINIVRRALQAPARQIVENAGDEASIVVGKILEKNTDDFGYNA
QTGEYGDMIAMGIIDPVKVVRTALQDAASVAGLLVTTEAMIAELPKKDAPAMPGGMGGMG
GMDMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagagattaaatttggccgtacggcgcgcgaaaagatgctgcgcggcgtc
gacatcctcgctgatgccgtcaaggtaacgctcggcccgaagggccgtaacgtcatcatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtttcggtcgccaaggaaatc
gaactcgaagacaagttcgagaacatgggcgcccagatggtccgcgaagtcgcttcgaag
accaatgacatcgccggcgacggcacgacgactgcaaccgttctcgcccaggcgatcgtt
cgcgaaggcgccaaggccgttgctgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgccgtttcggaagtcgtcaaggatctccaggccaaggccaagaagatcaacacc
tcggaagaagtggcccaggtcggcacgatttcggccaacggtgaaaagcagatcggcctc
gacattgcagaagcaatgcagaaggtcggcaacgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccttacttcgtcaccaacccggaaaagatgatcgccgacctcgacgatgtcttcgtt
ctcctgcacgagaagaagctctcgaaccttcaggcgatgctcccggttctcgaagccgtc
gtccagactggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagctctcgca
acgctcgtcgtcaacaagctgcgtggcggcctgaagatcgccgctgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccatcctgacgggcggcacggtg
atctccgaagacctcggcatcaagctcgaaagcgtcacgctcgacatgctcggccgtgcg
aagaaggtttcgatctcgaaggagaacacgacgatcgttgacggtgccggccagaagtcg
gacatcgaaggccgcgtttcccagatcaaggcccagatcgaagaaaccacttcggactac
gatcgcgaaaagctgcaggaacgtcttgccaagctcgctggcggtgttgccgtcatccgc
gtcggcggttcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgccctc
aacgcgacgcgcgctgccgttcaggaaggcatcgttccaggcggcggcgttgccctgctg
cgttcctccgtcaagatcaccgtcaagggcgaaaacgacgatcaggaagccggcatcaac
atcgttcgccgggctctgcaggctccggcccgccagatcgttgaaaacgctggtgacgaa
gcctcgatcgttgtcggcaagatcctcgagaagaacaccgacgacttcggctacaacgca
cagaccggcgaatatggcgacatgatcgccatgggcatcatcgacccggtcaaggtcgtt
cgcaccgcgctccaggacgcagcctcggttgccggccttctcgtcaccaccgaagccatg
atcgccgagctgccgaagaaggacgctccggcaatgccgggcggcatgggcggcatgggc
ggcatggacatgatgtga
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