Sinorhizobium fredii HH103: SFHH103_01454
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Entry
SFHH103_01454 CDS
T01731
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sfh
Sinorhizobium fredii HH103
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfh03032
]
SFHH103_01454 (gyrA)
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_01454 (gyrA)
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SFHH103_01454 (gyrA)
DNA replication proteins [BR:
sfh03032
]
Prokaryotic type
DNA Topoisomerases
SFHH103_01454 (gyrA)
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SFHH103_01454 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
CCE95952
UniProt:
G9A6S2
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All DBs
Position
1565946..1568729
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AA seq
927 aa
AA seq
DB search
MTEQSTPGGGKTPPGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKYHPHGNMAIYDALARMAQDWSLRLPLIDGQGNFGSV
DGDPPAAERYTECRLQKAAHSLLDDLDKETVDFRENYDGTLQEPVVVPAKFPNLLVNGAG
GIAVGMATNIPPHNLSEVINGCIALVDDPAIELPELMQIIPGPDFPTGALILGRAGIRQA
YETGRGSVIMRGRAHIEPMRGDREQIIITEIPYQVNKATMIEKMAELVRDKRIEGISDLR
DESDRQGYRVVIELKRDANAEVILNQLYRYTPLQTSFGCNMVALNGGKPEQLTLLDMLRA
FVSFREEVVSRRTKYLLRKARDRAHVLVGLAIAVANIDEVIKLIRHAPDPQTAREQLMER
RWPAHDVDALIRLIDDPRHRINEDGTYNLSEEQARAILDLRLQRLTALGRDEIGDELNKI
GEEIRDYLEILSSRLRIMQIVKDELAAVRDEFGTPRRTEIAEGGPDMDDEDLIAREDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMSTRDEDFVTRLFVANTHTPVLFFSSRGIVYK
EKVWRLPIGTPQSRGKALINMLPLEPGERITTIMPLPEDEATWENLDVMFSTTRGTVRRN
KLSDFVQVNRNGKIAMKLEEEGDEILSVETCTEFDDVVLTTAVGQCIRFPVSDVRVFAGR
NSIGVRGISLGDGDRIISMAILAHVEAEPWERAAYLRRSAAERRAATGEDEEIVLVGEEV
TNGGELSNERYEELKEREQFVLTLSERGFGKRSSSYDFRTSGRGGKGIRATDTSKTAEIG
ELVAAFPVEHNDQIMLVSDGGQLIRVPVDGIRLASRATKGVTIFSTAKDEKVVSVERISE
PDGEDEIEEIVTAGDAIAAEPPADAEE
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaacaaagcactcccggcggcggaaaaactccgccaggcatcgagccgatttcc
atcatcgaggaaatgcagcggtcctatctcgattacgccatgagcgtcatcgtttcccgt
gcgcttcccgatgtgcgcgacggcttgaaacccgttcaccgccgcatcctctacgggatg
agcgagctcggcatcgattggaataagaaatacgtcaaatgcgcccgcgttaccggcgac
gtgatgggtaaataccatccgcacggcaacatggcgatttacgacgcgctggcgcgcatg
gcgcaggactggtcgctccggctgccgctgatcgacggccagggcaatttcgggtccgtc
gatggcgatccgccggcggccgagcgttacaccgagtgccggctgcagaaggcggcccat
tcgctgctcgacgacctcgacaaggaaacggtcgatttccgcgaaaactacgacggcacg
ctgcaggagccggtcgtcgttccggcgaagttcccgaacctgctcgtcaacggcgcgggc
ggcatcgccgtcggcatggcgaccaacatcccgccgcacaatctgagcgaagtcatcaat
ggctgcatcgcgctggtcgacgatccggcgatcgaattgccggagctgatgcagatcatt
ccggggccagacttcccgaccggcgcgctgatcctcggtcgcgccggcattcgccaggcc
tatgagacgggcaggggttccgtgatcatgcgcggccgcgcccatatcgagccgatgcgc
ggcgatcgcgagcagatcatcatcaccgagattccctatcaggtgaacaaggcgacgatg
atcgagaagatggccgaactggtgcgcgacaagcgcatcgagggcatctccgacctgcgc
gatgagtccgaccggcagggttatcgcgtcgtcatcgagctgaagcgagatgccaatgcc
gaggtcatcctcaaccagctctatcgctatacgccgctgcagacctccttcggctgcaac
atggtggcgctcaacggcggcaagcccgagcagctgacgctgctcgacatgttgcgcgct
ttcgtttccttccgcgaggaagtcgttagccggagaacaaaatacctgctgcgcaaggcc
cgcgaccgggcccacgtcttggtcggccttgccatcgccgtcgccaatatcgacgaggtg
atcaagctcattcgccatgcgcccgatccgcagacagcgcgcgagcagttgatggagcgc
cgctggccggcccatgacgtcgatgcgctgatccggctgatcgacgatccgcgccaccgg
atcaacgaggatggcacctacaacctctcggaagagcaggcccgcgccatcctcgacctg
cgcctgcagcgtctcaccgcgctcggccgcgatgaaatcggcgacgaactcaacaagatc
ggcgaggagatccgcgactatctggaaatcctttcctcgcggctgcgcatcatgcagatc
gtcaaggacgagctcgcggccgtccgcgacgagttcggcacgccgcgccgcaccgagatc
gccgagggcggtccggatatggacgacgaggatctgatcgcccgagaagacatggtcgtc
accgtgtcgcacctcggctacatcaagcgcgtaccgctgaccacctaccgggcccagcgg
cgcggcggcaagggccgctccggcatgtcgacacgggacgaggatttcgttacccggcta
ttcgttgccaacacccatacgccggttctgttcttctcctcgcgcggcatcgtctacaag
gagaaggtctggcgattgccgatcggcacgccgcaatcgcgcggcaaggcgctgatcaac
atgctgccgctggaacccggcgaacgcatcacgacgatcatgccgctgcccgaggacgaa
gcgacctgggagaacctggacgtgatgttctcgacgacgcgcggcacggtgcgccgcaac
aagctttccgacttcgtccaggtcaaccgcaacggcaagatcgcgatgaagcttgaggag
gagggcgacgagatcctctcggtcgagacctgcacggaattcgacgacgtggtgctgacg
acggcggtcggccagtgcatccgcttcccggtctccgacgtgcgcgtctttgcgggccgc
aattcgatcggcgtgcgcggcatttcgctcggcgatggcgaccggatcatctccatggct
atcctcgcccacgtcgaagccgaaccgtgggagcgtgcagcctatctgagacgatcggct
gccgaacgccgcgccgcaacgggcgaagacgaggagatcgtgcttgtcggtgaggaggtc
accaacggtggcgaactctccaatgagcgctatgaggaactgaaagagcgcgagcaattc
gtcctgacgctctctgaacgaggtttcggcaagcgctcgtcctcctacgacttccgcacg
tcgggccgcggcggcaagggcattcgtgccacggacacctcgaagacggcggaaatcggc
gagctcgtcgcagccttcccggtcgagcacaacgaccagatcatgctggtttccgatggt
ggccagctcatccgcgtaccggtcgacggcattcgcctggcgagccgcgccaccaagggc
gtcacgatcttctccaccgccaaggacgaaaaggtcgtctcggtggaacggatcagcgaa
ccggacggtgaggacgagatcgaggagatcgtcacggctggcgacgccattgcggccgaa
ccgccagccgacgccgaggagtga
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