Sinorhizobium fredii HH103: SFHH103_02200
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Entry
SFHH103_02200 CDS
T01731
Name
(GenBank) similar to tRNA nucleotidyltransferase (CCA-adding enzyme)
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFHH103_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfh03019
]
SFHH103_02200
Enzymes [BR:
sfh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SFHH103_02200
Messenger RNA biogenesis [BR:
sfh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SFHH103_02200
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
CCE96695
UniProt:
G9A8W5
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All DBs
Position
complement(2356453..2357712)
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AA seq
419 aa
AA seq
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MTSIAAEPWFKAPSLGRVFELLNADGGEVRVVGGAVRNSLLGLPAGDVDLATTWRPQDVV
ERAKGAGIKVVPTGIDHGTVTLVIDGIPYEVTTLRRDVATDGRRAEVAFGIDWNADAERR
DFTINALYADAKGEIFDYVGGLPDIERRTLRFIGSAAERVAEDYLRILRFFRFFAHYGSG
RPDAEGLRSCAQARAKLATLSAERVWGEMKKLLAAEDPGRALLWMRQAGVLGEVLPETEK
WGIDAIPGLIAAEKIFSWVPEPLLRLAAIVPPDADRLEAMAARLRLSKAEAAFLARFAET
PAIAATLADAALDRELYRKGAEGIVARLKLSLASARRKSETDPAFLAETAAFQRLLTRAE
KWQRPVFPLSGVDVLKAGVPAGPKVGELLTELENFWIDRNFNIDRATLVARLESWLRPD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgatcgccgccgaaccctggttcaaggctccttcgctcggccgcgtcttcgag
ctgttgaacgccgacggcggcgaagtgcgggtcgtcggcggcgccgtccgcaacagcctc
ctcggcctcccggccggtgacgtcgatctggcgacgacctggcgcccgcaggatgtggtg
gaacgggcgaagggtgccggcatcaaggtggtgccgacgggcatcgaccacggcaccgtc
accctggtgattgacggaataccctatgaggtgacgacgctgcgccgcgacgtggcgacc
gacggccgccgcgccgaagtggccttcggcattgactggaacgccgacgcggaacgccgc
gacttcaccatcaacgccctctatgccgacgccaaaggtgagattttcgactatgtcggc
gggctgcccgacatcgagcgccggacgctgcgcttcatcggcagcgccgccgaacgggtc
gcggaggactatctgcgcatcctgcgcttcttccgctttttcgcgcattacggttcgggc
cgcccggatgcggaggggctgaggtcttgcgcgcaggcgcgcgcgaagcttgcgacactt
tcggccgagcgcgtctggggcgagatgaagaagctgcttgcggccgaagatccgggtcgc
gccctgctttggatgcgccaggcaggcgtgctcggcgaggtcctgccggaaaccgagaaa
tgggggatcgacgccattccgggcctgatcgcggccgagaaaattttctcctgggtgccg
gagccgcttttgcggctggcggccatcgtcccgcccgacgccgatcggctcgaggcgatg
gcggcgcggctgcgcctgtcgaaagcggaagcggcctttcttgctcgatttgccgagact
ccggccattgccgccacgctcgccgacgcagcgctcgaccgcgaactctatcggaagggt
gccgagggcattgttgcgcgcctcaagctttcgctcgcgtcagcgcggcgcaaatcggaa
acggatccggccttcctggccgagactgccgcctttcagcggctgttgacgcgggcggag
aagtggcagcgtcccgtcttccccctgagcggggtcgatgtcctgaaggcgggcgtcccc
gccggaccaaaggtcggggaactgctgacggaactcgaaaatttctggatcgaccgcaac
ttcaatatcgaccgggcgacgcttgtcgcccggctcgaatcctggctgcgtccggactga
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