Sinorhizobium fredii HH103: SFHH103_02607
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Entry
SFHH103_02607 CDS
T01731
Symbol
alkA
Name
(GenBank) putative DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFHH103_02607 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_02607 (alkA)
Enzymes [BR:
sfh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SFHH103_02607 (alkA)
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SFHH103_02607 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
CCE97102
LinkDB
All DBs
Position
complement(2806640..2807287)
Genome browser
AA seq
215 aa
AA seq
DB search
MRIIRTSDDIDAGLAGLVMLDARLEHVIDRAGPVPLRRTDPGYRGLANIIVSQMVSKASA
AAIWKRMEGSLGEISAAAVLSLEDDDCRQFGLSRAKADTLRRVAAAAVAGEIDLDGICNI
EAPAAIHELTAIKGVGRWTAEVYLLFCAGHPDVFPAGDVALQNAVGHAFGFELRPSAIEV
DSLAASWSPWRSVAARLFWAYYAHEMRRDALPVTP
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcattcggacaagcgacgacattgacgccggcctcgccggtctggtgatgctc
gacgcgcgcctcgaacacgtcatcgacagggccgggccggtgccgctcaggcgcaccgat
ccgggttatcgcggccttgccaatatcatcgtttcgcaaatggtctccaaggcgagtgcg
gcggcgatctggaagcgcatggagggatcgctcggcgagatcagcgctgccgccgtgctt
tcccttgaggacgacgactgccggcagttcggtctttcccgcgccaaggccgacacgttg
cggcgcgtggcggcggcggccgtggccggcgagatcgatctcgacggcatctgcaacatc
gaggcgccggcggcgatccacgagttgacggccatcaagggcgtcgggcgttggacggcg
gaagtctatctgctgttctgcgccggccatccggatgtcttcccggccggcgacgtggcg
ctgcagaatgcggtcggtcatgcgttcggtttcgaactgcgtccgagcgcaatcgaggtc
gattcgctcgctgcctcgtggtcgccgtggcggagcgtcgcggcgcggctcttctgggcc
tattatgcacatgagatgcggcgtgatgcgcttcccgtgacgccttga
DBGET
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