Sinorhizobium fredii HH103: SFHH103_02804
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Entry
SFHH103_02804 CDS
T01731
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SFHH103_02804 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_02804 (ruvB)
Enzymes [BR:
sfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFHH103_02804 (ruvB)
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SFHH103_02804 (ruvB)
RecFOR pathway proteins
SFHH103_02804 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_14
AAA_3
AAA_16
AAA_22
Rad17
AAA_2
nSTAND3
AAA_18
AAA_17
RNA_helicase
AAA_33
AAA_28
TsaE
NTPase_1
AAA_24
DUF815
IstB_IS21
ABC_tran
NB-ARC
Sigma54_activ_2
Cytidylate_kin
AAA_7
NACHT
DUF6189
Motif
Other DBs
NCBI-ProteinID:
CCE97296
UniProt:
G9ABK5
LinkDB
All DBs
Position
complement(3019253..3020293)
Genome browser
AA seq
346 aa
AA seq
DB search
MTEAARLIAPEKRGEDLDATLRPQSLDEFTGQAEARANLKIFIEAARNRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVRLN
FYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVARAEAV
TRQIADEALTRLLVDSMGLDQLDRRYLTMIAHNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYLIQQGFIQRTPRGRVLTANAWKHLGLNPPKDVEASQFRLTLEDE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagccgcacgcctgattgcgccggagaagcggggcgaggacctcgacgccaca
ctgcgcccgcagtcgctcgacgagtttaccggccaggcggaggcgcgcgccaatctcaag
atcttcatcgaggcggcgcgcaaccgcggcgaggcgctcgatcatgtgctcttcgtcgga
ccacccggcctcggcaagacgacgttggcgcagatcatggccaaggagctcggcgtcaat
tttcgttccacctcgggcccggtcattgccaaggccggcgatctcgcggcgctgctcacc
aatctcgaagagcgcgacgtgctgttcatcgacgaaatccaccggctgaacccggcggtc
gaggaaatcctctatccggccatggaggatttccagctcgacctgatcatcggcgagggg
ccggcggcgcgctcggtgaagatcgacctcgcgaaattcacgctggtggcagcgacgacg
cgcctcggcctcttgacgacgccgctccgcgatcgcttcggcattccggtgcggctcaat
ttctacacggtcgaggaactggagctgattgtccgccgcggcgcgcggctgatgggcctc
ggcatgactgacgagggggcgcgtgaaatcgcccgccgcgcccgcggcacgccgcgcatc
gccggccgcctgttgcggcgggtgcgcgacttcgccgaggtggcgcgtgccgaggcggtg
acccggcagatcgccgacgaggcactgacccgattgctggtcgacagtatggggctcgac
cagctcgaccgccgctatctgacgatgatcgcccacaatttcggtggcggaccggtcggc
atcgagacgatcgcggcggggctttccgagccgcgcgacgcgatcgaggacatcatcgag
ccctacctgatccagcagggcttcatccagcgcacgccgcgcggccgtgtcctgacggca
aatgcctggaaacatctgggcctcaatccgccgaaggatgtcgaggcgtcacagttccgg
ctgacgctcgaggacgaatag
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integrated database retrieval system
