Sinorhizobium fredii HH103: SFHH103_02852
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Entry
SFHH103_02852 CDS
T01731
Name
(GenBank) putative sigma-54 dependent DNA-binding response regulator
Organism
sfh
Sinorhizobium fredii HH103
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_7
HTH_50
AAA
Mg_chelatase
AAA_2
MCM
HTH_22
HTH_23
RWP-RK
AAA_16
HTH_29
Phage_AlpA
HTH_28
AAA_22
HTH_Tnp_1_2
TetR_N
Phage_CP76
Adeno_shaft
Motif
Other DBs
NCBI-ProteinID:
CCE97344
UniProt:
G9A0E8
LinkDB
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Position
complement(3068388..3069932)
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AA seq
514 aa
AA seq
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MTSHILVIDDDPVQRRLLTNMIERLGHVEHLADNGRSGLELLERKGGMINVILLDLLMPE
MNGHGFLEALAERGIDTPVIVQTGQGGIETVVGAMQAGAFDFLVKPVSPERLSIAIGNAL
KMASRDGRVKTARRPRGGAIGFDDIVSASPAMIRVLDLARRAAQSNIPIVLEGESGVGKE
MVARAIQAASDRASKPFVTVNCGAIPHNLVESILFGHEKGAFTGATEKHSGKFVDADGGT
LFLDEIGDLPLEVQVKLLRAVQQGEIETIGARQPQRVNVRLISATNKDLINEVREGRFRE
DLYYRLNVFPITIPALRRRKEDIPVLVRAFVERFTAEQRLNQPVTVSSGAMALLTAYDWP
GNIRQLENAIFRAVVLAEGGELSVKDFPQIATQIPGYVVADRSGFSWGEAGPERRAPAGA
APTVLASRPNIPERPEPFGAMPEGRSENAIASVDEGGEVRKLAEVEEELIRFALKFYRGQ
MSQVARKLGIGRSTLYRKLKDYGIDPDNPLREAA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcccatattcttgtcatcgatgacgatccggtgcagcgccgtttgctgacgaac
atgatcgagcggctcggccatgtcgagcatctcgccgacaacgggcgcagcgggctcgaa
ctcctggagcgcaagggcggcatgatcaatgtcatcctgctcgatctcctgatgccggag
atgaacggccacggtttcctcgaggcgctcgccgaaaggggtatcgatacgccggtcatc
gtccagacagggcagggcggcatcgagacggtcgttggggcgatgcaggcgggtgccttc
gatttcctcgtcaagccggtctccccggagcgactgtcgatcgccatcggcaatgcgctg
aagatggcgagccgcgacggaagggtcaagaccgcgcgccgaccgcgcggcggcgcgatc
ggtttcgacgatatcgtctcggcaagcccggcgatgatccgcgtcctcgatctggcgcgg
cgtgccgcgcagtcgaacatcccgatcgtgctcgagggtgaatccggtgtcggcaaggag
atggtggcgcgggcgatacaggcggcgagcgaccgggcgagcaagcccttcgtcaccgtc
aactgcggcgccatcccgcataacctcgtcgagagcatcctcttcggccatgagaagggc
gcctttaccggcgcgaccgaaaagcacagcggcaagttcgtcgacgccgacggcggcacg
ctcttcctcgacgagatcggcgacctgccgctcgaggtccaggtgaagctgctgcgcgcc
gtccagcagggcgagatcgagacgatcggcgcgcgccagccgcagcgcgtcaacgtgcgg
ctgatctcggccaccaacaaggatctgatcaacgaggtgcgcgagggacgcttccgcgag
gacctctactaccgcctcaacgtcttcccgatcaccatcccggcgctgcgccggcgcaag
gaggacattcccgtcctggtgcgcgccttcgtcgagcgcttcaccgcggagcagaggctc
aaccagcctgtgacggtttcgagcggcgcgatggcgctgctgaccgcctatgactggccc
ggcaatatccgccagctcgagaacgccatcttccgcgccgtcgtgcttgccgaaggcggc
gaactcagcgtcaaggactttccgcagatcgccacccagataccgggctacgtcgttgcc
gaccgcagcggcttctcctggggcgaagcgggcccggaacgccgcgcgccggctggcgcc
gccccaaccgttctcgcttcgcgccccaatattccggaaaggcccgagccgttcggcgcg
atgccggaaggacgttccgaaaacgccatcgccagcgtggacgagggcggagaggtgcgc
aagcttgccgaagtcgaggaggaactgattcggtttgcgctcaagttctatcgcggccag
atgagccaggtcgcccgcaaactcggcatcgggcgctcgactctctaccgaaagctcaag
gattacggcatcgatccggacaatccactgcgcgaagcggcataa
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